| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1446 |
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| Symbol | |
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| ID | 8529837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 1568674 |
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| End bp | 1571043 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_003258852 |
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| Protein GI | 261820746 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGATCA TCAATACAGG TCTCTTCCCC TTACTCATGT ATGCCCCGTT TGCGCTGTTT
TATTCTGCGA TGGTTCTCGC GGAAGAGTAC ACCGATCTTC CGGCCCCCCC TCGTGCCATG
CCCTCACTCA GCGAATCCGT TTATTACTTA ACGCTTTCCG TTAACGGACA GAGCGATAAC
ACCGTGGTGC CCGTCACGTA TCGTGCTGGA AATTATTATG TAGATGCCGC GATACTGCGG
CAGAATCACG TTCGCCTGCC GCAGCAAAGC ACGGGGCTCG TCAATGTCAG CACGCTGCCA
GACGTCACCG CCGATTACGA TCAGGCCATA CAGCAGCTAC AGATCACCGT GCCCACGCTC
TGGCTACCCG AACAATCCGT TGAAGGTGGA GGACAAGACA TGGCGCGCCT CCCCGCTCGC
AGCAGCCCCG GTTTACTGTT CAACTATAAT CTGTATTACA CCGCCCCCCG CAGCAATTCG
GATTCACTCA GCAGTTGGAT GGAACAGCGT TTTTTTAGCC CCTATGGCAC CTTATCCAAT
TCGGGGATCT ACAATTTTAT TTCGGGCAGT AATAACACGC AGCAAGGTGG TTATCGGCGT
TTTGATACCT ATTGGCGCTA TAACGATAGC GAACGTATGA TCACCTACCA GGTTGGCGAC
CTGATTAGCA ACGCCTTGAC GTGGAGCAAT TCAGTACGTA TGGGCGGCCT ACGTGTCGCC
CGTAATTTCG GCCTTCGCCC GGATATCGTA ACCTATCCGA TGCTGCAATA TACCGGTACT
GCCGCCGTAC CCAGCACGCT TGATCTGTTT ATCAACGGCT ATAAAGCCAA CAGCACTAGC
CTGAATGCAG GCCCTTTCAC CCTAACCAAT ACGCCTTACC TGAACGGTGC AGGGGAAGCA
ACCGTGATTA CGACGGACGC TCAGGGGAGG CAAGTCTCTA CCACGATCCC TTTTTACGTC
TCCAACGTAT TGCTGAGAGA GGGGTTAAGC GATTTCGATC TGTCGGTTGG CGTTTTGCGT
CAGAACTATG GCGTACAAAA TAATGCCTAT ACTGACGATC CTGCCATCAG CGGCATCTAT
CGATATGGGT TGGCCAATAA ACTGACAGTT TCAGCGCATG GTGAAGCGGT AAAAGATCTG
TATCTGCTCG GCGCAGGAGC CGACTTTACC CTTGGCCGCT GGGGAACGTT GAGTTCGTCC
TACAGTCAGA GCGAAAAGGA CGCGACCGGG CACCAATACA CCGCAGGCTA CTCCTATTAC
ACCTCCGCAT TTGGCCTGAG CGTTCAACAT GCCAAACGCA GTGAAGAATA CCGTGATTTA
ACGGCTGTGC TCACGGAAGG TCGCCTCAGC CGAGAAAGCA ACCAGGCAAC GCTCAGCAGC
CAAATTTTCG GTAAAGGCAA TGGCTCGTTT GGCGTGGGTT ATTTCGATAT CCGTGCCTAC
GATTCAACCC GCACCCGCCT GCTGAATCTC TCTTTCAGCC GCCAGATCTG GCAAGGCAGC
TCCATCTACC TCGCCGTTAA CAAAGCGCTA GGGGAAAACG GCTACAGCGC CCAACTTCAG
TTCATGATGC CTTTTGGTAA CAACAGCAGC GTCAATGCTG GGGTTCAGCG CGACAACAAT
GGCGATTATT CACCGCGCGT AGGAGTGAAC CGTACCGCGC CGACAGAAGG TGGCTTTGGC
TGGAACGCGG CGTATGGTGC GGGCAGAAAT CCTTATCATC AAGGTGCACT AAATTGGCGC
GGCCCGTATG CCATGCTGGC TGGCGGGGCG TATGGCAATG AAGGAAATAC CACACAGTGG
GGGGAACTGA GCGGTTCTCT GATCTACATG AACGGAGGGC TTTTTCCCAG TAACCGCATC
AACGACGCCT TTATTGTTGT CGATACCGAG GGATACCCCG ACGTCCCGGT GAAATATGAA
AACCAGTTGG TGGGGAAAAC CAATAAACGC GGCCATTTAC TCGTACCGTG GGTCGTATCC
AATTACCCCG CAAAAGTGGA AATTGATACG TTACAACTGC CAGCCAACGT CACTACCCCA
CAGGTGGAGT CACGCGTGTC GGTAAAAGAA GGCAGCGGCA CCGTCGTGAC GTTCCCCGTT
CATGTCGTGC GCTCAGCCAA CATTATGCTG CGCAATACAG ACGGTAATCC TCTCACCATC
GGCACCTGGA TAACAGACGA AGCCAGCGGC AACACCACGA TCAGCGGCTA TGACGGTCTG
GCCTACTTCG CCAATCTGGG GACATCGACT CGCTTGCGCT TTAAACAAGA AGATGGACGG
CTTTGCCGTG TGGCGTTCTC ACTACCGGAA TCACAGACCA TGATGGCAAC CATCGGCCCG
CTTACCTGCC AGACTGACCC AAAAGGATAA
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| Protein sequence | MRIINTGLFP LLMYAPFALF YSAMVLAEEY TDLPAPPRAM PSLSESVYYL TLSVNGQSDN
TVVPVTYRAG NYYVDAAILR QNHVRLPQQS TGLVNVSTLP DVTADYDQAI QQLQITVPTL
WLPEQSVEGG GQDMARLPAR SSPGLLFNYN LYYTAPRSNS DSLSSWMEQR FFSPYGTLSN
SGIYNFISGS NNTQQGGYRR FDTYWRYNDS ERMITYQVGD LISNALTWSN SVRMGGLRVA
RNFGLRPDIV TYPMLQYTGT AAVPSTLDLF INGYKANSTS LNAGPFTLTN TPYLNGAGEA
TVITTDAQGR QVSTTIPFYV SNVLLREGLS DFDLSVGVLR QNYGVQNNAY TDDPAISGIY
RYGLANKLTV SAHGEAVKDL YLLGAGADFT LGRWGTLSSS YSQSEKDATG HQYTAGYSYY
TSAFGLSVQH AKRSEEYRDL TAVLTEGRLS RESNQATLSS QIFGKGNGSF GVGYFDIRAY
DSTRTRLLNL SFSRQIWQGS SIYLAVNKAL GENGYSAQLQ FMMPFGNNSS VNAGVQRDNN
GDYSPRVGVN RTAPTEGGFG WNAAYGAGRN PYHQGALNWR GPYAMLAGGA YGNEGNTTQW
GELSGSLIYM NGGLFPSNRI NDAFIVVDTE GYPDVPVKYE NQLVGKTNKR GHLLVPWVVS
NYPAKVEIDT LQLPANVTTP QVESRVSVKE GSGTVVTFPV HVVRSANIML RNTDGNPLTI
GTWITDEASG NTTISGYDGL AYFANLGTST RLRFKQEDGR LCRVAFSLPE SQTMMATIGP
LTCQTDPKG
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