Gene Pecwa_1420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_1420 
Symbol 
ID8529810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp1539695 
End bp1540972 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content55% 
IMG OID 
Productgeneral secretion pathway protein L 
Protein accessionYP_003258826 
Protein GI261820720 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAG CGGGAAAATG GAAGAAAAAA GCCGCGAAAG TCCCATTAAA TCGAGGTTCG 
GTGGTTCGAC ATCCGTGCCT CATTGTGCGT CTTCCGGTAG AGGAACAGGG CGAAATCGAA
TGGCAGGTCC GTTCACCCAA TGGGGAGAAT TTACTAAGTC AGGGGCGTGG TAGCGTAGAG
CAGGTTCGTC CCGCGTTAGC GGCTTACCCG TCTGTGACGT TTACTCGTGT CCTGGTTCCG
GCCACTGACG TGACCTTTTA TGCCCTGACG CTACCCCGAC AGGCGCGGCG TCAGTTGACG
CAAGTCGTGC CATTTATGCT GGAAGATCAA CTGGCTACGG ACATTGAAAA ACTGCATTTT
GCCGTGTTGG AAATTCATGG TGATGACGGT ACGGTCGCGG TGGTGGAGAA AAGGCGAATG
CAGCAGTGGC TGGCGCAGTG TGATGCGTTG GGTCTCCACG TTGATGCTCT ATTGCCTGAT
GCCCGCGTAT TGCCAAAACA TTTGGATGGG TGGAGCGCGT TGGAACATGA TGGCATGTGG
CTGTTCCGTC AGCCTACGGG CCATGCCATG GCGGCAGAAT CGTCTTGGTG TGGCGACCTG
CTGAAGGCAT CTATGCCGTT GCCTGCGATA TACAGCTATA GCGCTGCATC GGTCGGTGGT
GAGCTGTCAC AGTACGAATG GCAGGAGGAG GGCGAGTGGA AGGCGCAGCC GGAAACGGAT
CTCTTCACAC TGGCAGCAAC AACGTCCCTA TCTGCCTCGG TTGATTTACG ACAAGGCGAT
TACGCGGCGG AGAAAGCGTG GCAAAACACT CTGCGGCCGT GGCGTAGCGT TGGAATCGCT
TTTGCCTGCT ACCTCTTGTT GGTCGTGGCC GATGCAGGTT GGGCGCACTA TCAACTTTAT
CAGCAGGCCG AACATTGGCG GCAGGAGAGC GTGCGTGTCT ATCGGCAAAT TTTCCCTTCC
GAGACGAATG TCGTTAACCC GCGAGCACAG ATGCAGCAGC ATCTGCAACG TACCGCGGCC
GGGGGCGCAG GGAAGGGGCT ACTGGAGCAA TTGAACCCTT TGCAACAACT CATGACGCAA
AATAGCGCGA TCAAAATTCA GTCTCTGTCT TACGACGGTT CTGCTGGTGA ATTCCGGTTG
GCGTTGCAGG GTTCGTCTTA TCAGGAGTTA GAGCAGTTTC AGCAGCAGGC GGCTACCTAT
TATCAGGTGC AGGCAGGAGA GATGCGGCAG GAAAACGATC GGGTTGAAGG CCGGTTAACA
TTAAGGAGCC AGCAATGA
 
Protein sequence
MKLAGKWKKK AAKVPLNRGS VVRHPCLIVR LPVEEQGEIE WQVRSPNGEN LLSQGRGSVE 
QVRPALAAYP SVTFTRVLVP ATDVTFYALT LPRQARRQLT QVVPFMLEDQ LATDIEKLHF
AVLEIHGDDG TVAVVEKRRM QQWLAQCDAL GLHVDALLPD ARVLPKHLDG WSALEHDGMW
LFRQPTGHAM AAESSWCGDL LKASMPLPAI YSYSAASVGG ELSQYEWQEE GEWKAQPETD
LFTLAATTSL SASVDLRQGD YAAEKAWQNT LRPWRSVGIA FACYLLLVVA DAGWAHYQLY
QQAEHWRQES VRVYRQIFPS ETNVVNPRAQ MQQHLQRTAA GGAGKGLLEQ LNPLQQLMTQ
NSAIKIQSLS YDGSAGEFRL ALQGSSYQEL EQFQQQAATY YQVQAGEMRQ ENDRVEGRLT
LRSQQ