| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1214 |
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| Symbol | |
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| ID | 8529603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 1314410 |
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| End bp | 1315762 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | |
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| Product | type I secretion outer membrane protein, TolC family |
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| Protein accession | YP_003258635 |
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| Protein GI | 261820529 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.227292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATACGTA GATACCGTTT TGCTTTATTA CCTTTTATTA CCTTTTTTTC CACAGCGACA
TATGCAGAGA CGCTCCAGGA AGCAATAAAA AATACGCTCT ACACACACCC TGAAGTAAAC
GCATCCATTA ATAGCCGTTT TTCTGCCGAA CATGATTTGC GTGCGGCAAA AGGCGGGTAT
CTTCCTTCCA TCACGCTGAA TGCAGGCGTT GGCCGCGAAG AAACCGATAG CCCATCAACA
CGTGCAAGCG CCAATAAACG CACGGAGCTC AGCCGCCAGG AATCAAGTAT CGCTCTGAAT
CAGACGGTAT TTGATGGTTT CGCCACTTCT AGTGAAGTTG GCAGACAGCG TGCCACGGTC
AATTCACGCG CCTATAAAGT ATTAAACACC AGTGAGGCAA CGGCGTTAAA TACCGTTCAG
GTGTATATTA ATGTGCTGCA ACGTCAGGAA TTCGTCCGTT TAGCAGAAGC TAACCTCGCA
AGCCATGAGC GCATTTACGA TCAAATAAGG CTGCGTAGTG AGCAAGGCGT AGGAAGACTG
GCCGATCTGG ATCAGGCGGA AGCGCGTCTG GCACAAGCAC GCAACAATAC ATTGACAGAA
AAAACCAATC TGGATGATGC CAAAATCAAC TACATGAGCG TTGTGGGGAA AGTGCCTGAG
AATTTGGTGA TACCCGATAC GTCCGCGATA AAAATCCCCT CCTCGTTGGA AGAAGCACAG
CGCATCATGC TGGCAAATAG CCCGGCACTA AAATCCGCAG AATCGGATAT TGAAGCCACT
CAGCAGCAAT ATGAAACATC AAAATCAACC TTTTATCCAC GCCTCAACGT TGAACTCTCT
CGCACAATGA ATAACAACAT TGATGGGACG CGCGGCCAAA ACAATGAGTG GCAAGCGATG
CTGCGGATGC GTTATAACCT GTATGAGGGC GGTAGCAGCA AGGCCAATAT GGAATCTAAA
GCTTATCAGA TAAAAGAAGC ACAGGATGTC CGAAATAATG CCCTGCGCCT GCTGAATGAA
GAGCTGAAGC TAGCTTGGTC AGCGCTAAAC AACGCACGTC AGCAGGTTCC GATTGCCGCC
GAATACGCTG ACCGTAGTAT GAAAGTACGT ACTGCCTATC AGAAGCAATT TGGTCTGGGA
GAAAGGACGC TATTGGACTT GCTGGATAGT GAAAACGAAC TGTTCACCGC CCAGAGGCGT
TTGGTCGAGG TTCGCTTTAT CGCCCTTTAT ACCGAATACC GGATCACATC ACGTATGGGA
GAGTTATTGA ATCGTTTAGC GATCCCAGCG CCTGATGCGG GTACCAGCTT AACAAACGTG
ACAACCCACG CAGAGTTACC AAGCCTTAAT TAA
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| Protein sequence | MIRRYRFALL PFITFFSTAT YAETLQEAIK NTLYTHPEVN ASINSRFSAE HDLRAAKGGY
LPSITLNAGV GREETDSPST RASANKRTEL SRQESSIALN QTVFDGFATS SEVGRQRATV
NSRAYKVLNT SEATALNTVQ VYINVLQRQE FVRLAEANLA SHERIYDQIR LRSEQGVGRL
ADLDQAEARL AQARNNTLTE KTNLDDAKIN YMSVVGKVPE NLVIPDTSAI KIPSSLEEAQ
RIMLANSPAL KSAESDIEAT QQQYETSKST FYPRLNVELS RTMNNNIDGT RGQNNEWQAM
LRMRYNLYEG GSSKANMESK AYQIKEAQDV RNNALRLLNE ELKLAWSALN NARQQVPIAA
EYADRSMKVR TAYQKQFGLG ERTLLDLLDS ENELFTAQRR LVEVRFIALY TEYRITSRMG
ELLNRLAIPA PDAGTSLTNV TTHAELPSLN
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