Gene Pecwa_1162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_1162 
SymbolpcnB 
ID8529545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp1252848 
End bp1254296 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content52% 
IMG OID 
Productpoly(A) polymerase I 
Protein accessionYP_003258583 
Protein GI261820477 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000172758 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGTTGA TTTATCCATC ACTATCGAGG TGTATTATCT TTTCCCGAGT TGCTAATTTT 
TGTCGTAAAG TACTGAATCG TGAGAACGAA ATGGTCGAAT CAGAGGAACC ACGTCAGCAT
CTGACGGTGA TCCCGCGTGA CCAACATACT ATTTCACGCA GTGACATCAG CGATAATGCG
CTGAAAGTAC TTTATCGCCT GAATAAAGCG GGCTACGAAG CTTATCTGGT TGGCGGCGGA
GTACGCGATC TGCTGCTGGG CAAAAAGCCG AAGGATTTTG ATATCACCAC TAACGCCACG
CCCGATCAGG TGCGCAAGTT GTTCCGCAAC TGTCGTTTAG TTGGGCGTCG TTTCCGTCTC
GCACATATCA TGTTTGGGCC AGAGGTGATT GAAGTTGCCA CGTTCCGTGG TCACCACGAT
CAGCATCAGG AGCAGCAAGA AGTCAAAAAC TCTTCTCAGC AGGCTCAAAG CGGCATGCTG
TTGCGCGATA ACATTTTTGG TTCGGTAGAA GAAGACGCCC AACGCCGTGA TTTCTCGATC
AATAGCCTCT ACTACAGCAT TTCTGATTTC AGTGTTCGCG ATTATACCAA TGGCCTGAAC
GATCTGCGTC AGGGTGTCAT TCGCATGATC GGCGATCCTG AAACGCGCTA CCGAGAAGAT
CCCGTGCGCA TGCTGCGTGC CGTTCGTTTC GCCGCCAAGC TGAACATGAC CGTCAGCCCG
GAAACCGCCG AACCGATTCC TCGTCTGGCC TCATTGCTGC ACGATATTCC CGCCGCGCGG
ATGTTTGAAG AATCGCTGAA GCTGCTTCAG TCAGGCTATG GCTATCCAAC CTATAAAATG
CTGTGTGAAT ACCAACTGTT CCAGCCGCTT TTTCCGCTGC TGAGCCGTCA TTTCACACCA
AACGGCGATT CCACATTGGA ACGCATGGTT GCTCAAGTGT TGAAAAACAC CGATCAACGT
TTGCAGAACG ACATGCGGGT AAATCCGGCA TTTTTGTTCT CTGCCATGCT GTGGTATCCG
CTGATTGAAC ATGCGCAAAA GCTGGCTCAG GAAAGCGGTC TGGCCTACTT CGATGCATTT
GCGCTGGCAA TGAACGATGT ACTGGACGAA CAGTGCCGTT CTCTGGCGAT CCCTAAGCGT
ATTACCTCGT TAGTCCGCGA TATCTGGCAA CTGCAAACGC GCCTGTCTCG TCGTCAGGGT
AAGCGTGCTT ATAAGCTAAT GGAACATCCT AAATTCCGCG CTGCGTATGA TCTGCTTTGC
CTGCGTGCCG AAATTGAAAA TCATCAGGAG CTGCTGCGTC TGGCTCAGTG GTGGGGAGAA
TTCCAGGTTG CGACACCGCC ACGCCAACAA ACCATGCTGA GATCGCTAGA TGACGGCCCA
ACACCACATC GTCGCTCCCG CCCTCGTCGT CCACGTAAAC CTACAACAGC ACGCAGGGAT
CAAGCCTGA
 
Protein sequence
MLLIYPSLSR CIIFSRVANF CRKVLNRENE MVESEEPRQH LTVIPRDQHT ISRSDISDNA 
LKVLYRLNKA GYEAYLVGGG VRDLLLGKKP KDFDITTNAT PDQVRKLFRN CRLVGRRFRL
AHIMFGPEVI EVATFRGHHD QHQEQQEVKN SSQQAQSGML LRDNIFGSVE EDAQRRDFSI
NSLYYSISDF SVRDYTNGLN DLRQGVIRMI GDPETRYRED PVRMLRAVRF AAKLNMTVSP
ETAEPIPRLA SLLHDIPAAR MFEESLKLLQ SGYGYPTYKM LCEYQLFQPL FPLLSRHFTP
NGDSTLERMV AQVLKNTDQR LQNDMRVNPA FLFSAMLWYP LIEHAQKLAQ ESGLAYFDAF
ALAMNDVLDE QCRSLAIPKR ITSLVRDIWQ LQTRLSRRQG KRAYKLMEHP KFRAAYDLLC
LRAEIENHQE LLRLAQWWGE FQVATPPRQQ TMLRSLDDGP TPHRRSRPRR PRKPTTARRD
QA