Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1162 |
Symbol | pcnB |
ID | 8529545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 1252848 |
End bp | 1254296 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | poly(A) polymerase I |
Protein accession | YP_003258583 |
Protein GI | 261820477 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000172758 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGTTGA TTTATCCATC ACTATCGAGG TGTATTATCT TTTCCCGAGT TGCTAATTTT TGTCGTAAAG TACTGAATCG TGAGAACGAA ATGGTCGAAT CAGAGGAACC ACGTCAGCAT CTGACGGTGA TCCCGCGTGA CCAACATACT ATTTCACGCA GTGACATCAG CGATAATGCG CTGAAAGTAC TTTATCGCCT GAATAAAGCG GGCTACGAAG CTTATCTGGT TGGCGGCGGA GTACGCGATC TGCTGCTGGG CAAAAAGCCG AAGGATTTTG ATATCACCAC TAACGCCACG CCCGATCAGG TGCGCAAGTT GTTCCGCAAC TGTCGTTTAG TTGGGCGTCG TTTCCGTCTC GCACATATCA TGTTTGGGCC AGAGGTGATT GAAGTTGCCA CGTTCCGTGG TCACCACGAT CAGCATCAGG AGCAGCAAGA AGTCAAAAAC TCTTCTCAGC AGGCTCAAAG CGGCATGCTG TTGCGCGATA ACATTTTTGG TTCGGTAGAA GAAGACGCCC AACGCCGTGA TTTCTCGATC AATAGCCTCT ACTACAGCAT TTCTGATTTC AGTGTTCGCG ATTATACCAA TGGCCTGAAC GATCTGCGTC AGGGTGTCAT TCGCATGATC GGCGATCCTG AAACGCGCTA CCGAGAAGAT CCCGTGCGCA TGCTGCGTGC CGTTCGTTTC GCCGCCAAGC TGAACATGAC CGTCAGCCCG GAAACCGCCG AACCGATTCC TCGTCTGGCC TCATTGCTGC ACGATATTCC CGCCGCGCGG ATGTTTGAAG AATCGCTGAA GCTGCTTCAG TCAGGCTATG GCTATCCAAC CTATAAAATG CTGTGTGAAT ACCAACTGTT CCAGCCGCTT TTTCCGCTGC TGAGCCGTCA TTTCACACCA AACGGCGATT CCACATTGGA ACGCATGGTT GCTCAAGTGT TGAAAAACAC CGATCAACGT TTGCAGAACG ACATGCGGGT AAATCCGGCA TTTTTGTTCT CTGCCATGCT GTGGTATCCG CTGATTGAAC ATGCGCAAAA GCTGGCTCAG GAAAGCGGTC TGGCCTACTT CGATGCATTT GCGCTGGCAA TGAACGATGT ACTGGACGAA CAGTGCCGTT CTCTGGCGAT CCCTAAGCGT ATTACCTCGT TAGTCCGCGA TATCTGGCAA CTGCAAACGC GCCTGTCTCG TCGTCAGGGT AAGCGTGCTT ATAAGCTAAT GGAACATCCT AAATTCCGCG CTGCGTATGA TCTGCTTTGC CTGCGTGCCG AAATTGAAAA TCATCAGGAG CTGCTGCGTC TGGCTCAGTG GTGGGGAGAA TTCCAGGTTG CGACACCGCC ACGCCAACAA ACCATGCTGA GATCGCTAGA TGACGGCCCA ACACCACATC GTCGCTCCCG CCCTCGTCGT CCACGTAAAC CTACAACAGC ACGCAGGGAT CAAGCCTGA
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Protein sequence | MLLIYPSLSR CIIFSRVANF CRKVLNRENE MVESEEPRQH LTVIPRDQHT ISRSDISDNA LKVLYRLNKA GYEAYLVGGG VRDLLLGKKP KDFDITTNAT PDQVRKLFRN CRLVGRRFRL AHIMFGPEVI EVATFRGHHD QHQEQQEVKN SSQQAQSGML LRDNIFGSVE EDAQRRDFSI NSLYYSISDF SVRDYTNGLN DLRQGVIRMI GDPETRYRED PVRMLRAVRF AAKLNMTVSP ETAEPIPRLA SLLHDIPAAR MFEESLKLLQ SGYGYPTYKM LCEYQLFQPL FPLLSRHFTP NGDSTLERMV AQVLKNTDQR LQNDMRVNPA FLFSAMLWYP LIEHAQKLAQ ESGLAYFDAF ALAMNDVLDE QCRSLAIPKR ITSLVRDIWQ LQTRLSRRQG KRAYKLMEHP KFRAAYDLLC LRAEIENHQE LLRLAQWWGE FQVATPPRQQ TMLRSLDDGP TPHRRSRPRR PRKPTTARRD QA
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