Gene Pecwa_1125 details

Gene Information

• Locus tag: Pecwa_1125
• Symbol: rimM
• ID: 8529501
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 1212620
• End bp: 1213168
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 46%
• Product: 16S rRNA-processing protein RimM
• Protein accession: YP_003258546
• Protein GI: 261820440

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAATC AACTTAGCCC AAAACCTCCC GTTAACCCGA TTGTGATGGG GAAAATTGGG 
TCGGCGTATG GCATCCGAGG TTGGCTCAGA GTGTTTTCAT CCACCGAAGA TGCCGATAGC 
ATTTTTGATT ATCAACCTTG GTTTATCCAG AGTAAAAGCG GTTGGCAGCT TGTCGAGATT 
GAAGGCTGGA AGTATCACAA TCAGGATCTG ATCATCAAAG TGAAAGGTGC TGATGACCGT 
GATGCGGCTA ATTTACTGAC CAATTGTGAA ATTGTCGTAG ATTCGTCACA ACTGCCCGAT 
CTGGGCGAAG GTGATTATTA CTGGAAGGAT CTTATTGGCT GTCAGGTCGT GACCGTAACG 
GGTTATGAGT TGGGTAAAAT CATCGATATG ATGGAAACTG GCTCGAACGA TGTGATGGTG 
ATAAAAGCCA ACTTGAAAGA TGCCTTCGGG GTCAAGGAAC GACTGGTTCC GTTCCTCACC 
GAACAGGTTG TTAAGCGTGT TGACCTTTCT GCTCAAACTA TTGAAGTAGA TTGGGATCCT 
GGTTTTTGA 

 

Protein sequence

MSNQLSPKPP VNPIVMGKIG SAYGIRGWLR VFSSTEDADS IFDYQPWFIQ SKSGWQLVEI 
EGWKYHNQDL IIKVKGADDR DAANLLTNCE IVVDSSQLPD LGEGDYYWKD LIGCQVVTVT 
GYELGKIIDM METGSNDVMV IKANLKDAFG VKERLVPFLT EQVVKRVDLS AQTIEVDWDP 
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