| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1080 |
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| Symbol | |
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| ID | 8529454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 1169489 |
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| End bp | 1171027 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | Sigma 54 interacting domain protein |
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| Protein accession | YP_003258501 |
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| Protein GI | 261820395 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.171864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACATG CCCTCAAACT GGCGCTTGCG CTCACCCAAC AGCATGATGA AGCCAGTCTG
TGCGGCTGGC TGCTGGAGGC GATGCAGGCC GCCTGGCAAC CGCAAGGGAT GCTACTGGGT
ATGGTGGATG TCAGCGGCAG GCAACTGATC TGCCAGGGGC GGGTGCATGA AACGCCAGTG
GCGCTGAGTC TGGGGGTGGA TGACTTTAGC CACCCTCTGG CTTACGCGCT GCATAAAAAT
CAGGCGCGCA CCTGGGATTC ACTCTATGGC GGTGCCCGCA TTGAGCACCG TGAGTTTCAG
CAGATGCTGA TCTCTGTCGG GGCGAGTTGC GGGCTTCACG CGCTGCCGCT GCTGTCGGAT
GGCGGTAAGC CGCTGGCAGT GCTGGCGCTG TTGGATACGC CGGCGCGCCT GCAAACGCTG
CATCAGCAGG GAGAATGCGA ACAACTGACG CAGGTGTTTT GTCGTCAACT GATGCTGCTG
CGTGAGTTGG CGCATACCCG GCGGGAACAG GTCGCGCTGA GAGATTCGCT CCGCCAGATT
AAGGATGAAG GGCAGAGCCG TCGCGAGCAG GAAAAACGGG TGGAAACCAC GTTGGTGGGG
CAGTCTGCCG TGATGAAAGC GCTACATCAG CAGATTTATC AGGCGGCAAA ACACCGTCTT
TCGGTGCTGA TTCAGGGCGA AACCGGTTCA GGGAAAGAAG TGGTGGCGCG ACTGCTGCAT
CAGTGTTCTG AACGTGCCGA CAAGCCCTTT ATTGCCATCA ACTGTGCCGC AATCCCTGAA
AATCTGATTG AGAGCGAGCT GTTTGGCTAT CAAAAAGGGG CGTTCTCCGG CGCGCAAAGC
AACAAAGTAG GTCTGGTAGA ACAGGCTAAT GGTGGAACCC TGTTTTTGGA TGAGGTCGGC
GATATGCCGC AGGCCATGCA GGCCAAGCTG TTAAGGGTAT TGGAGACGCA TAGCTTCCGT
TCCCTCGGTG CGGATAAAGA GGTTCATTCT GACTTCCGTT TGATCGCCGC GACACATCAG
CCGCTGGAAC AACAGGTGTC TGACGGGGTG TTTCGGCAGG ATCTCTACCA TCGCCTCTGC
CAGTGTCTAT TGCAGCTCGC GCCGCTGCGT GAGCGGCCGG ACGATATTCG CCTGCTGTGC
GAGCACTTTA TCGATCAATT TGCGGACGAA CGACAAAAGC ACGTTGGGCC GTTAAGCCGT
ACTTTCCTTC GCCAATTAAT GGGATATGAC TTTCCCGGCA ATGTACGGGA ACTGCGCAAC
CTGCTGGAGG TCGTCTGCGC GAATACGCCG GACGGCGATG TGCTGTCTCT GACATCGTTG
TCCCCCGAAC TACGTGAGCG ACTGATGAGC AGTTCGGTGG AGGAACAGGA TTGCTATCAG
CACATTCACG ATTTACGTAT CGCCACACAA CGGTATGAAG CGGCTGTGAT TGAAGCACGT
CTGCGCCAGT TTCAGGGCAA CCGCCTGCTG GTGGCCGATA GCCTCAATAT CCCTAAACGT
ACTCTTGACC ACAAATGCCA GAAGCTGGAG GTAAATTGA
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| Protein sequence | MQHALKLALA LTQQHDEASL CGWLLEAMQA AWQPQGMLLG MVDVSGRQLI CQGRVHETPV
ALSLGVDDFS HPLAYALHKN QARTWDSLYG GARIEHREFQ QMLISVGASC GLHALPLLSD
GGKPLAVLAL LDTPARLQTL HQQGECEQLT QVFCRQLMLL RELAHTRREQ VALRDSLRQI
KDEGQSRREQ EKRVETTLVG QSAVMKALHQ QIYQAAKHRL SVLIQGETGS GKEVVARLLH
QCSERADKPF IAINCAAIPE NLIESELFGY QKGAFSGAQS NKVGLVEQAN GGTLFLDEVG
DMPQAMQAKL LRVLETHSFR SLGADKEVHS DFRLIAATHQ PLEQQVSDGV FRQDLYHRLC
QCLLQLAPLR ERPDDIRLLC EHFIDQFADE RQKHVGPLSR TFLRQLMGYD FPGNVRELRN
LLEVVCANTP DGDVLSLTSL SPELRERLMS SSVEEQDCYQ HIHDLRIATQ RYEAAVIEAR
LRQFQGNRLL VADSLNIPKR TLDHKCQKLE VN
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