| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1079 |
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| Symbol | |
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| ID | 8529453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 1166889 |
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| End bp | 1169486 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | type VI secretion ATPase, ClpV1 family |
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| Protein accession | YP_003258500 |
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| Protein GI | 261820394 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0505801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTCGAA TTGAACTGCC GACACTGGTT GAACGACTCA ACCCCGTGTG CCGTCATATG
CTGGAAGAAG CGGCGGCACT CTGTATTCAG CATCAGGGTG CGGAAATCCG TATTGAGCAC
TTGTTGATGA AAATGCTGGA AACGCCGCTG TGTGATGTGC GGCAGATCCT CAAGCGTGCG
GGCGTTGATG CGGATGAGTT GTCTTCGCTG CTGTTGCCTT CCTCCGTGGA TAAAGAATTT
GACGCGGGCT ATCCCTCATT CTCCCCTCTG CTGGTGGAGT GGCTACAGGA TAGCTGGCTG
CTGGCCTCTG CTGAGTTTCA GCACGTGCGT CTGCGCAGCG GCATATTGTT GCTGGTCTTG
CTGCTGACGC CCAATCGCTA TGTGGCAGGC GCGGTGTCCC GCCCGCTGGC GCAGATTAAC
CGTGAACTTT TACGCCAGCA GTTTGATGAG TGGGTGAAAG ATTCGGTGGA AACGGACGTC
GCGGTGCAGT CCGCCACGGC CGAACAGGCA GCCGCGGCGA ACACGCAGCT CTCGCGCTAT
ACGCAAAATG TGACGGAATC CGCTCGACAA GGGCAGTTGG ACCCGGTGTT GTGCCGCGAC
CATGAAATCG ATCTGATGAT CGATATTCTC TCCCGTCGTC GTAAAAACAA CCCGATTGTC
GTGGGGGAAG CGGGTGTTGG TAAAAGTGCG CTGATCGAAG GGCTGGCGCT GCGTATTGTG
GCGGGCGCCG TGCCGGAAAG ATTACGAGAT GTAGAACTGC TTACGCTCGA TTTGGGGGCG
ATGCAGGCGG GTGCGTCAGT TAAAGGCGAA TTTGAGAAAC GCTTCAAAGG TGTGATGCAG
GAAGTGAAGG ATGCGCCACG CCCGATTATT CTATTTATTG ATGAAGCGCA TACGCTAATC
GGGGCAGGCA ATCAGGCCGG TGGGCTGGAT GTGTCCAATC TGCTTAAGCC TGCGCTGGCG
CGCGGTGAGC TGCGTACCAT CGCGGCAACC ACCTGGAGCG AATACAAAAA ATATGTCGAG
AAGGACGCTG CGCTTTCCCG TCGCTTCCAG CTCGTCAAAG TCGGTGAACC GAACGCGGAA
GAAGCCACGG TGATCCTGCG TGGGCTGCGC GGTATCTATG AAAAAGCACA TGGCGTCCTG
ATTGATGAAG ATGCGCTTCA GGCGGCGGCG CAACTGTCGG CGCGCTATAT CTCTGGTCGC
CAACTCCCCG ATAAAGCGAT TGACGTGCTG GATACCGCGA GTGCGCGCGT AGCCATTAAC
CTGACGACAC CACCGCGTGC CGTCAGCCAA CTACAGACCC GTCTACGCCA GCAGGAAATG
GAAATCACCC AGCTTGAGCG GCAGGCGCGC ATCGGTCTGG GCAATACCGA AGACCGCTTA
GTGGAACTGC GTAATGCTCG CGAAGCCGGC GCGGCACAGT TGGTACAGTT AGAAGCCGAT
TGGCAGCAGC AGAAAACGCA GGTTCAGCGC GTGATTGAAC TGCGCACGGC GTTGCTGGAT
GAAGATCAAG CCGTCGATTT CGATGCTGTG TCGGCTGCGG CGGAACTGGC GGACTGCGAA
CAGGCGCTGG AAGCGTTGCA ACAATCCTCC GTGCTGGTCT CTCCTCACGT TGATAAAACA
CAGATTGCTG CCGTGATAGC CGAGTGGACG GGCGTGCCGC TTAACCGAAT CTCGCAGGGT
GAAATGGATA TCGTCACGCG CCTGCCTGAA TTCCTGGGTG AAACGATTAA AGGACAGCAG
TTGGCGATTG CTCAATTGCA TAAACATTTG CTGACCGCGC GTGCGGATCT TCGTCGTCCT
GGGCGTCCGT TGGGGGCTTT CCTGCTGGTG GGGCCGAGCG GTGTGGGTAA AACGGAAACC
GTGGTCCAGA TTGCCGACCT GATGTTTGGC GGACGTAACT ATCTGACCAC CATCAATATG
TCGGAATATC AGGAGAAACA TACCGTTTCA CGCCTGATCG GTTCGCCGCC GGGCTACGTC
GGGTTTGGTG AGGGGGGCGT ATTGACCGAA GCGATCCGCC AGAAACCGTA TTCCGTGGTA
CTGCTGGATG AAGTGGAAAA AGCACACCCG GATGTCCTGA ATCTGTTCTA TCAGGCCTTT
GATAAAGGTG AACTGGCCGA CGGTGAAGGC CGGGTCATCG ACTGCCGCAA TGTGGTGTTT
TTCCTGACGT CCAATCTCGG GTTCCAGACG ATCGTGAACT ACGCCGAGCA GTCGGATGTG
TTGCTGGATG CGCTCTATCC TGAGCTGGCG GCTTTCTTTA AACCTGCACT ATTGGCGCGT
ATGGAAGTCA TCCCTTATCT GCCGCTGGCG CATGCCACCA TGGTCGAGAT CGTACAGGGT
AAATTGTCGC GTCTGGTTTC TCTGCTGCAA CAGCGCTTTA GTGCTGAGGT CATCATTGAG
GATGAGGTGC CGGAAGAAAT TCTCCGGTTG GCAAACCGCA GCGAAAACGG GGCGCGTATG
CTGGAGTCAG TGATTGATGG GGCATTGCTG CCACCGGTAT CACTACAACT ACTGCAACGA
CTGTCTGCGG GAGAACCCGT CAGCCGTATT CATTTCCGCG TCGAAGCCGG CCAGTTCCAG
ACCGAGGTGG AGGGCTGA
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| Protein sequence | MIRIELPTLV ERLNPVCRHM LEEAAALCIQ HQGAEIRIEH LLMKMLETPL CDVRQILKRA
GVDADELSSL LLPSSVDKEF DAGYPSFSPL LVEWLQDSWL LASAEFQHVR LRSGILLLVL
LLTPNRYVAG AVSRPLAQIN RELLRQQFDE WVKDSVETDV AVQSATAEQA AAANTQLSRY
TQNVTESARQ GQLDPVLCRD HEIDLMIDIL SRRRKNNPIV VGEAGVGKSA LIEGLALRIV
AGAVPERLRD VELLTLDLGA MQAGASVKGE FEKRFKGVMQ EVKDAPRPII LFIDEAHTLI
GAGNQAGGLD VSNLLKPALA RGELRTIAAT TWSEYKKYVE KDAALSRRFQ LVKVGEPNAE
EATVILRGLR GIYEKAHGVL IDEDALQAAA QLSARYISGR QLPDKAIDVL DTASARVAIN
LTTPPRAVSQ LQTRLRQQEM EITQLERQAR IGLGNTEDRL VELRNAREAG AAQLVQLEAD
WQQQKTQVQR VIELRTALLD EDQAVDFDAV SAAAELADCE QALEALQQSS VLVSPHVDKT
QIAAVIAEWT GVPLNRISQG EMDIVTRLPE FLGETIKGQQ LAIAQLHKHL LTARADLRRP
GRPLGAFLLV GPSGVGKTET VVQIADLMFG GRNYLTTINM SEYQEKHTVS RLIGSPPGYV
GFGEGGVLTE AIRQKPYSVV LLDEVEKAHP DVLNLFYQAF DKGELADGEG RVIDCRNVVF
FLTSNLGFQT IVNYAEQSDV LLDALYPELA AFFKPALLAR MEVIPYLPLA HATMVEIVQG
KLSRLVSLLQ QRFSAEVIIE DEVPEEILRL ANRSENGARM LESVIDGALL PPVSLQLLQR
LSAGEPVSRI HFRVEAGQFQ TEVEG
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