| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1076 |
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| Symbol | |
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| ID | 8529450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 1164219 |
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| End bp | 1164743 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | type VI secretion lipoprotein, VC_A0113 family |
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| Protein accession | YP_003258497 |
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| Protein GI | 261820391 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.556943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCTGC GGGCATTTTG CTTATGTTCG CTGATGGTCG TGCTGTCGGG GTGTTCCACG
CTGAGCAAGA TGGCGCAGGT CGCGGCGAAT CCTGATATCC AGGTGGGCAG CAACAATCAT
CAGCCTTCTA CCGTGGGTTT TAGCCTGCTG GCGGAACCGG ACGTTAACCC GAATGAAAGT
GGTGAAGCTG CACCTATCGA ATTCCAACTG GTCCTGCTGG CGGAAGATTC TCGCCTGTTA
GCCACGGATT ATGACCAGAT CACGACGGAT ATCGAAAAGG CGCTGGCCAA GAATTACCTC
AGTCATCAGG ACTACACGCT GTTGCCGGGG CAGTTCAAAT ACCTGCCGCC AGAAGCGTTG
GATGAAAAGG TGCACTACCT CGGCGTGGTC GCTCGCTATG CGGATTCGGA AAGTGCGGAA
TGGCGCAAGG TGATCAAGCT AAAAAATGTC GGGCAAACGT ATCAGATCCT CGTGCACCTG
CGCCGGGATG AAGTCGAAAT CAAAAAAGAC CAAGAAGAAG AATAA
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| Protein sequence | MMLRAFCLCS LMVVLSGCST LSKMAQVAAN PDIQVGSNNH QPSTVGFSLL AEPDVNPNES
GEAAPIEFQL VLLAEDSRLL ATDYDQITTD IEKALAKNYL SHQDYTLLPG QFKYLPPEAL
DEKVHYLGVV ARYADSESAE WRKVIKLKNV GQTYQILVHL RRDEVEIKKD QEEE
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