| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1071 |
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| Symbol | |
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| ID | 8529445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 1158353 |
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| End bp | 1159831 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | type VI secretion protein, EvpB/VC_A0108 family |
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| Protein accession | YP_003258492 |
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| Protein GI | 261820386 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAATAG TTGAAGAACA GGTTCAGGCA GGAGCCGCCA GTGCTTCTGG ATCGTTGCTT
GATGACATCA TGGCTCAAGC GCGTATCAGC CCGGTTGATG AAGGCTACAG CGTGGCTAAA
CAGGGCATTG CCGCGCTGGT TGCTAACATT CTTGATAGCG GTAATGCAGC AGAACCCGTG
AATAAAGCGC TGGTCGATAG CATGATCGTC GAACTGGACA AAAAACTTAG CAAGCAGATT
GACGTGATTC TGCATGCAAA AGAATTACAG GAACTGGAAT CTTCCTGGCG TTCGATGAAA
CTGCTTATCG ATCGCACTGA TTTCCGTGAA AACATCAAAC TGTTGGTGTT GCATGCGACG
AAAGAAGAGC TGTTGGAAGA TTTCGAATTC GCCCCTGAAA TCTCACAGTC TGGCTTCTAT
AAGCACGTGT ATTCCAGCGG TTACGGCCAG TTCGGCGGTC AGCCTATTGG TGGCGTGATC
GGTGACTATG CGCTGACGCA AAGCTCACCA GACATCAAAC TGATGCAGTA TGTCAGCGCC
GTTGGCGCGA TGGCGCATGC ACCGTTCATC TCTTCCGTTG CACCAACCTT CTTTGGCGTG
GATCGCTTCA CCGATCTGCC TTCAATCAAA GATCTGAAAT CCGTTTTCGA AGGCCCTGCC
TACACGAAAT GGCGTTCGCT GCGTGAATCT GAAGACGGCC GCTATCTGGG GCTGACGGCA
CCGCGCTTCC TAGCTCGCTT GCCTTATGAT CCGGTAGAAA ACCCGATTAA GGGTTTCAAC
TACAAGGAAG ATATCAGCAC CGATCACGAA CACTATCTGT GGGGCAATAC CGCTTATCTG
ATGGGAACGG CATTGACGGA CAGTTTCGCG AAATACCGCT GGTGTCCGAA CATTATCGGT
CCACAGAGCG GTGGGGCGAT TACCGACCTG CCGGTGCATG TTTATGAAGC GATGGGCCAA
CTTCAGGCCA AGATCCCGAC TGAAGTGCTG ATCACCGATC GTCGCGAATA TGAAATGGCC
GAAGAAGGCT TTATCACGCT GACGATGCGT AAAGACAGTG ACAATGCCGC CTTCTTCTCC
GCTAACTCAG TGCAGAAGCC GAAGGTGTTC CCAAACACCA AGGAAGGCAA AGAAGCGGAA
ACCAACTACA AGCTGGGTAC GCAACTGCCG TACATGTTCA TCATCAACCG TCTGGCGCAC
TACATCAAAG TGCTTCAGCG TGAACAGATT GGCTCATGGA AAGAGCGTCA GGATCTTGAA
CGTGAGTTGA ATACCTGGAT TAAACAGTAC ATCGCCGATC AGGAAAACCC GCCGGCAGAT
GTCCGTAGCC GTCGTCCTCT GCGTGCTGCA CAAATCAAAG TGCTGGATGT GGAAGGAGAA
CCAGGTTGGT ATCAGGTCAC TATGTCTGTG CGCCCGCACT TCAAGTACAT GGGGGCAAAC
TTTGAGCTGT CGCTGGTAGG GCGTCTGGAT AAGGAATAA
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| Protein sequence | MSIVEEQVQA GAASASGSLL DDIMAQARIS PVDEGYSVAK QGIAALVANI LDSGNAAEPV
NKALVDSMIV ELDKKLSKQI DVILHAKELQ ELESSWRSMK LLIDRTDFRE NIKLLVLHAT
KEELLEDFEF APEISQSGFY KHVYSSGYGQ FGGQPIGGVI GDYALTQSSP DIKLMQYVSA
VGAMAHAPFI SSVAPTFFGV DRFTDLPSIK DLKSVFEGPA YTKWRSLRES EDGRYLGLTA
PRFLARLPYD PVENPIKGFN YKEDISTDHE HYLWGNTAYL MGTALTDSFA KYRWCPNIIG
PQSGGAITDL PVHVYEAMGQ LQAKIPTEVL ITDRREYEMA EEGFITLTMR KDSDNAAFFS
ANSVQKPKVF PNTKEGKEAE TNYKLGTQLP YMFIINRLAH YIKVLQREQI GSWKERQDLE
RELNTWIKQY IADQENPPAD VRSRRPLRAA QIKVLDVEGE PGWYQVTMSV RPHFKYMGAN
FELSLVGRLD KE
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