| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1007 |
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| Symbol | |
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| ID | 8529381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 1087671 |
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| End bp | 1088867 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003258431 |
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| Protein GI | 261820325 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATCAC GATTCTTTAC ACGACGCCGT ACGATGATCG CACTTGGTCT CATTGCTACT
GCCGTGCTTA TTCATCTGTT TTTCAGCAAA CCATCGCCGG TACCAAACGC GATCACCACT
GCCGCAGAGA TCGCGGATCT CGAACAAACG GTCCTCGCCG ATGGAAACAT TGAGGCGCAG
AAGCAGGTTA GCGTCGGCGC TCAAGCCTCG GGGCAAATCA AAGCGCTGCA CGTCAAACTC
GGCGATAAGG TGAAAAAAGG GCAACTGATC GCCGAGATTG ATGACCTCAC CCAGCAGGAC
ACATTAAAGA ATGGCGAAGC GGCGCTAAAA AACGTTCAGG CCCAGCGAGC AGCCAAACTG
GCAGAGTTGC GTAATAACGA ATTAAGCTGG CAGCGTCAGC AAATGCTGAT GAAACGCGGC
GTGGGCGCAC AGGCCGATTA CGATAGTGCG AAGGCAACGC TCGATGCCAC CAGAGCCAAT
ATCGACGCGC TAGACGCTCA AATCGTTCAG GCGCAACTCA CCGTGAACAC CGCCAAAGTG
AATCTGGGAT ATACCCAAAT TCGCTCGCCG ATGGATGGCA CGGTGGTGGC GATTCCGGTT
GAAGCAGGCC AAACGGTAAA TGCGATCCAG ACTACGCCAA CCATTGCCAA AGTCGCCAAT
CTGGACACCA TGACCATCAA GGTAAAAATC TCAGAAGCCG ACGTCGTTAA GGTGAAAACC
GGCATGCCGG TCTGGTTCAG CATTCTGGGT GAACCGAATA AGCGTTATGA AGCTACGCTG
AGTTCGATTG AGCCCGCCCC AGACTCCATC AACACAGACT CGGCAACCAC ATCATCCAGC
ACAAGCAGTT CCAGTTCCTC ATCCAGCACC GCAATTTATT ACAACGGTCA GTTCGATGTG
CAAAACCCTG ATGGCGTATT GCGTATTTCG ATGACGGCGC AGGTCAATAT TCTGCTGTCT
TCGGTGAAAA ATGCCATCGT CGTCCCTGCG ACAGCGTTAA CCTTGCGCAA TGGCATGTGG
TACGTGCAGA TCGTCAATGC AAACAAGAAG ATTGAATCAC GCCTGGTCAC GCTTGGCCTC
AATGATAACG TGCGCACCCA GATCCGTTCA GGACTCAGCG TCGGGGAGCA GGTCGTTGTC
AGCCCCTCTC CCGGCGATGT AACCTCCACG CATCCCGGCC CACCGATGGG GATGTAA
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| Protein sequence | MQSRFFTRRR TMIALGLIAT AVLIHLFFSK PSPVPNAITT AAEIADLEQT VLADGNIEAQ
KQVSVGAQAS GQIKALHVKL GDKVKKGQLI AEIDDLTQQD TLKNGEAALK NVQAQRAAKL
AELRNNELSW QRQQMLMKRG VGAQADYDSA KATLDATRAN IDALDAQIVQ AQLTVNTAKV
NLGYTQIRSP MDGTVVAIPV EAGQTVNAIQ TTPTIAKVAN LDTMTIKVKI SEADVVKVKT
GMPVWFSILG EPNKRYEATL SSIEPAPDSI NTDSATTSSS TSSSSSSSST AIYYNGQFDV
QNPDGVLRIS MTAQVNILLS SVKNAIVVPA TALTLRNGMW YVQIVNANKK IESRLVTLGL
NDNVRTQIRS GLSVGEQVVV SPSPGDVTST HPGPPMGM
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