Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0999 |
Symbol | |
ID | 8529373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 1078203 |
End bp | 1079876 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | ABC transporter domain protein |
Protein accession | YP_003258423 |
Protein GI | 261820317 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGAAGA TCTCGGTGCA GTTTGTCGAT CTCTGCCGTC CCTTTTGGGG CGGCAAACGA AGTTGGCAGG CTTGGTTACT CCTGTTCATT GCCATCGGGA TGGGCGGGAT GATCGTCTAT CTCAACGTGT TGTTAAACGA GTGGAGTAAA ACGTTTTATG ATGCGTTAGG GGCATTCGAC GGCAGTTTGT TGCTTTCCCT GATGAAAGAA TATGGTATTT ACATCCTGCT CTATATCGGG TCGATCGTGT ATCAGGAATG GTTTACCAAA CTGCTGATTA TTCGCTGGCG TAGTGCGTTA ACCGCAGAGC TGGTGGAGAG CTGGCTGGCG AAGCGGGCAT TTTATCGTAT GTCGGTGGCG GGAAAAATTG ATAACCCTGA TCAGCGTATT GCTGAAGATA TCAACCTGTT TGTCGATAAA GCCGTTAGCC TGGTTGTTGA GTTTTTGATC GTGACGGCAC GCTTGTTTTC TTTTGTCGTT ATCTTGTGGG GGTTATCGGG CGTTCAGCGT TTTATGTTGT TTGGCGAAGA GTGGGTAATC AAAGGTTATC TGGTTTGGAT CGCTATTCTG TATACGCTGA TCGGCAGTCT GATCACGCAT GTGGTCGGGA AACGCCTGCA CGATATTAAT TACGATAAAC AAAAAGCGGA GGCAGATTTC CGCGCCGCGT TGCTGCGTAA GCATGATAAT GCTGAGCAAA TCGCGCTGTA CGGCGGCGAA GCGCAAGAGA AACGTCATCT TCAGCGTCAT TTCTCTGCCA TTGTGTTGAA CTGGGGCCGT TTTATGAATG CCGAACGTAA TCTGGGCTTT TTCACCACGG GTTATATGCG TGTGAGCCAG ATTGTGCCGG TCTTTGCGGC GTTGCCTGCC TTCTTGAGTA AAACAGTGAC GCTGGGCGGA TTGATGCAGA TTCGCGGGGC GTTTGCGCAG GTGCACGGTG CGCTGAGCTG GTTTATCCAT AAGTACAAGG AATTTGTGAT TCTGTCCGCC AGTATGGCGC GTTTGAGCCA GTTCAAGGAA GAAATCAAAC GTCATCAGTC CGAACAGGCC GATGCGCCAG TAGGGCAGGA TTTACGCATT GAACAGCTCT CCTTTACTAC GCCACAGGGC TCTCCGCTGT TGCAAAATGT GGATCTGAGT TGCGAAGCGG GTAGCTGGAG TAAATTTTCT GGCCGCAGCG GGTTAGGGAA ATCCACGCTG CTGCGCACGC TACATGGTTT ATGGCCGTAT TACGATGGCC GCTGGCAATC GCTCGAAGGG CGCAGCCTGC TGTTGCCACA GCAAAGCTAT TTAGGCCAGG GGACGCTGGC GGAGATCCTC TGCTATCCAC ACCCACCGCT GGCTGATAGC GAGATGCTGC GCCAGACGCT GGATAGCGTC GGGCTGGGTG CATGGCGCGA TCGTCTGGAT GAGCAACTGA ACTGGGATCG GGTGTTTTCC GGCGGCGAGC GGCAGCGTGT TGCCTTTGCC CGCGCGCTGA TTGCCAAACC GGATACGCTC TATCTGGATG AAGCGACCAG TAATTTGGAT CATGACTCTG CCAGACAGCT TCTGGCGCTG GTCAAGTTGG CGTTGCCGAT GTGTACCGTG GTGGCTATTA CGCACCAGAC AGAACTGGAC GATCTGTTCC CACATCGTTA TGACTTAACG GATTTCGCCT CGCCGCGCAG TTGA
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Protein sequence | MKKISVQFVD LCRPFWGGKR SWQAWLLLFI AIGMGGMIVY LNVLLNEWSK TFYDALGAFD GSLLLSLMKE YGIYILLYIG SIVYQEWFTK LLIIRWRSAL TAELVESWLA KRAFYRMSVA GKIDNPDQRI AEDINLFVDK AVSLVVEFLI VTARLFSFVV ILWGLSGVQR FMLFGEEWVI KGYLVWIAIL YTLIGSLITH VVGKRLHDIN YDKQKAEADF RAALLRKHDN AEQIALYGGE AQEKRHLQRH FSAIVLNWGR FMNAERNLGF FTTGYMRVSQ IVPVFAALPA FLSKTVTLGG LMQIRGAFAQ VHGALSWFIH KYKEFVILSA SMARLSQFKE EIKRHQSEQA DAPVGQDLRI EQLSFTTPQG SPLLQNVDLS CEAGSWSKFS GRSGLGKSTL LRTLHGLWPY YDGRWQSLEG RSLLLPQQSY LGQGTLAEIL CYPHPPLADS EMLRQTLDSV GLGAWRDRLD EQLNWDRVFS GGERQRVAFA RALIAKPDTL YLDEATSNLD HDSARQLLAL VKLALPMCTV VAITHQTELD DLFPHRYDLT DFASPRS
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