| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0953 |
|---|
| Symbol | |
|---|
| ID | 8529326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 1026881 |
|---|
| End bp | 1027798 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003258378 |
|---|
| Protein GI | 261820272 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAGA AAGTTAACTT TGCCGAATTG GTCAGCAAAG TGGTGGAATC AGCCGAGCTT
GAAGGCTTGC GCAATGTGGT GGAGAAGGAG CTTTTGCACT ACGACATCCT CTACTGTTTG
GATAATGCGG GCTTGCTGGA GCAGCTTACT TTTCAGGGAG GGACATCGTT AAGGCTGTGC
CATGGCGCAA ACCGCTTCAG TGAAGATTTG GATTTCGCCG GCGGTGTTGC GTTTTCTGGC
GCAGACCTTA AGAACATGAA AGCCTGTATT GAAGATTATC TAGGGAATCG GTACGGCCTT
GAAGTCAACG TGAAAGAGCC AAATGAATTG CGGAATGAAC CCGGTTATGA GGAAGTTCGC
ATCGACAAAT GGCAGGTATC CGTGACCACT GCACCGGAAA AACGCGATAT GCCAAGGCAA
CGGATCAAAA TTGAGATCGC CAATATCCCG GCTTATACCC GAACGCCGAT GACGCTAAAA
CGTAACTATG AGGTTTTACC TGATGGTTAT TCCGATACGC TGGTCATGTG TGAAACGCTG
AATGAAGTGA TGTGCGACAA ACTGGTTTCG CTTGTCGCCA CTACCAAATA TATCCGCTAT
CGTGACGTAT GGGACTTGCC GTGGCTGATC CAACAAAACG CGACTTATGA TATCGATCTG
ATTCGTAAGA AAATACAGGA TTACCGCATC TCTAATTATG ATGATCTACT GGCACAGCGC
ATACAGAGCA TTGATCAGGT TGTGGGGGAT GGCCGTTTTA GCGCTGAAAT GCGGCGATTC
CTGCCACAAG CAGTATTTGA TAGAACGTTA GGGCGTGAGG CTTTTAGCCA CTATTTAAGC
GGCGAACTAA AAGCACTCTT AAGTGCGTTA CAGCAAGCGT TAAAAGGAGA GGGCGGGAAA
GCGCCGTTCG TCATGTAA
|
|---|
| Protein sequence | MNQKVNFAEL VSKVVESAEL EGLRNVVEKE LLHYDILYCL DNAGLLEQLT FQGGTSLRLC
HGANRFSEDL DFAGGVAFSG ADLKNMKACI EDYLGNRYGL EVNVKEPNEL RNEPGYEEVR
IDKWQVSVTT APEKRDMPRQ RIKIEIANIP AYTRTPMTLK RNYEVLPDGY SDTLVMCETL
NEVMCDKLVS LVATTKYIRY RDVWDLPWLI QQNATYDIDL IRKKIQDYRI SNYDDLLAQR
IQSIDQVVGD GRFSAEMRRF LPQAVFDRTL GREAFSHYLS GELKALLSAL QQALKGEGGK
APFVM
|
|---|
| |