Gene Pecwa_0938 details

Gene Information

• Locus tag: Pecwa_0938
• ID: 8529311
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 1012327
• End bp: 1012953
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 54%
• Product: Lysine exporter protein (LYSE/YGGA)
• Protein accession: YP_003258363
• Protein GI: 261820257

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.283752
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCTTC ACCTCTGGCT GGCTTATACA GGGATCATCA TCGCCCTGAT TGCCATTCCG 
GGCCCGTCTG CCTTAATCAG CATGTCGCAC GGTTTACGCT ACGGCGCGTC ACGCGCGACA 
GCAACCGTAC TCGGCGGAGT CAGCGCGGCA ATGATATTGA TGTCCTGTTC AGCATTGGGG 
TTAGGCGCCA TCCTTGCCGC GTCAACCACC GCATTTATCG CATTAAAAAT TATTGGTGCG 
GTTTATCTCA TCTGGTTAGG CATCGCGTCA TGGCGTTCCA AAGATATGAC CACAGCGGAG 
CAGGATGTGC AGGAAACAGG GGCTCCAGGT TGGTTTCCGC TATACCGCAA AGGCTTTCTC 
GTTGGGATCA GTAATCCTAA AGATCTGCTG TTTTTCGCGG CACTGTTCCC CAATTTTATC 
GATACCAACG CCCCGCACGC CTTACAGCTC ATCATTCTGG CGGTAACCTG GGCTTTCTTC 
GATTTCAGCA TCATGTTTAT CTATGCCTGC ACCGGCCGCC GTTTATCGGG CCTGTTTTCC 
AATCCACGCC GCATCAAGCT GTTCAACCGC TCAACGGGTG GGATCTTTAT TCTGGCAGGC 
ACCACGCTAG CGGCGTCAAC GCGCTAA 

 

Protein sequence

MSLHLWLAYT GIIIALIAIP GPSALISMSH GLRYGASRAT ATVLGGVSAA MILMSCSALG 
LGAILAASTT AFIALKIIGA VYLIWLGIAS WRSKDMTTAE QDVQETGAPG WFPLYRKGFL 
VGISNPKDLL FFAALFPNFI DTNAPHALQL IILAVTWAFF DFSIMFIYAC TGRRLSGLFS 
NPRRIKLFNR STGGIFILAG TTLAASTR