| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0650 |
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| Symbol | |
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| ID | 8529015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 689957 |
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| End bp | 694225 |
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| Gene Length | 4269 bp |
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| Protein Length | 1422 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | |
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| Product | YD repeat protein |
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| Protein accession | YP_003258081 |
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| Protein GI | 261819975 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.614814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGATG ACATTCTGGC GCGTATTGCG CGTGTCGGTG CCATGCACGC GGGCAACCGG
CCCACGTTAC CGCCTGATTT ACCGGCACCC GGCAGCGGCT CGCCGCCGAC CTCACCGGGT
AAACCCATCA AACACAGCAG TTTCCTGGGG GCACTGCTCG GTGCCGTGGC TGGGGCTCTG
GTAGCAGCAG CGGTCGCGGC CGTGGCCGTT GCCCTGGTGG GCGTCACCGG TGGACTGGCG
ATTGCACTGG TCGGTGGGCT GGCGGTACTG GGAGCGGGAA GCCTGATATC GGCGGTCAGT
GGTCGGGTAT CCGCCATGGT GGACAGTGCC TCACCGCCGG CGGGGAAAGT GGACAGTGGT
TCACCGAATG TGTCGGTGGA AGGGAGTCCG GTTTCCCGTG CCGAAGTCGA TGTCGTTCTC
TGCACCAAAC ACAACGGTCC GCAACTGATT GCGCAGGGCA GTGAAACTGT CTTCGTGAAC
GGTCATCCGG CGGCGCGGAT AGGCGATAAA ACCGTGTGTG GTGCCACTAT CAAGGACGGG
GCAGCAACGG TGTTCTTTGG TTCCGGTCAG GCTACCGTAC TGGAGATACA GGATGAATTC
AGCGGCTGGC AAAAAGCGCT GCTGATTGCG GTGGAATTTC TGGTGCCGCC GACCCGTGGC
CTGTTTCGCG GGTTGGGGAA GTTATTCTTT CGCGGCCCCA AAGCGGTGAT GAAAGGGCTG
GGGGCTGGCG CACTCTGGGC AGGAAAACGG TTTACGCAAA AGACCCGCTG CGCCACCCGC
GCCTTTAAGG CGAACAAGGG TCGGGCACGG GTGACGCAAG CGGCCAAAGC CTTCAAGAAA
GACCCGGTGT ATATCGCCAG CGGTGAAGTA ATTGAAAGCC GCACCGATAT CGAGCTGGGC
CAGACTCTCC CGCTGCTGTT CGAGCGTACC TATCGCTCCG CTTCTTCACG GGGCGGATTA
GCAGGCCGTG GCTGGCAGGA TAGCTGGAGC GAAGTCGCGA CCCTCAGCGA CGATAACGGC
GACACCCATG TCACTATCAC TCTGGCGCAG GGTTATGACA TTGATTTCAC CTTCGGGATA
GGGGCCACCG TGGTGTACTG CGCCGAGTAC CCCGAATTCA AACTGGTGAA ACGCCATAAT
GGCTTTCACC TGTGGCACCG CGACAGCCAG ACCTGGCGGG CCTTTACCGT CAGACAGGGT
GACCGGCTAC GGCTGTCTGC CATTACCGAC AACCACCAGA ACCGTATCGA CTTTCTCCGT
GACCCCAAAG GCTACCTGCG TAAGGTGCGG CACAGCGACG GCATCGAGCT GCTGCTGGTG
TGGCAGGGGA AGTTTCTGCG TCAGGTACAG CGCATTGATG GCGGTCAGAA AACCGTACTG
GCCGAATACC GGCAGGATGA ACAAGGCCGA CTGGTCGAGG CGGATGCGGC CCATGCCTAT
CACCTGTTTT ATGACTACGA CAATCAAAAC CGCCTCATTC GCTGGCACGA CAACGACAAA
ACCTGGGCAC GGTATGAGTA TGACCATCAG GGCCGGTGCG TTTACACCAC CTGTGCCGAC
GGCTACCTGA CGGCGAATTT CGAGTACCTG TCCGACCGCG TGGTGATGAC CGACGGGCTG
GGTCAGCGCC ATGAATACGG CTTCAATGCC CTGTACCTGA TGGCCTGGGA GAAATCCCCG
CTCGGCCATG TCACCCGTTA TGAATACGAT GAGGTCGGCA ACCTGCTGCG GGAAATCTCT
CCGGCAGGGC GAGTCGTAGA ATTTGCCTAT CTGGATGATA CCGGACTGGT CAGCACCTTC
ACCGACGGCA GCGGCCACGC GTGGCAGTAC GCCTATGACG ACCATGAACG GCTTATCGGT
ATTACCGACC CGCTCGGGCG TAACTGGGCC TGGCAGTACG ACAGCAAGGG CAATCCGTTG
AGCCTGACCG GGCCGGACGC CAGTGAAGTC CGGTTTGCGT GGAACCGCTA CGGCCTGCTG
ACCGAAGTCA GCGACCAGAA CGGCCAGGTA CAGGCCAGCC TGTATTACGA CCATCGCCAG
CGCCTGTTAA GTGCCACCGA TGCGGAGTCC CGCACCCAGC AACTGCGCTA CGACCAGCAG
GACCGGCTGA CCACCTGGAC ACGCCCGGAT GGCTCCACTT ATCGGCTGGG CTATCGCCGT
GCAAGCTGGA AGCTGCCGGA GCAGCTGCTG CGCCCCGACG ACAAACAAGA GCAGCGCCAG
TACGACAAGC ACAACAACCT GCTGAACTAT ACCGACGGCA ACGGCGCAGT ATGGGCACAA
ACCTACGGCC CGTTTGACTT GTTAACCTCC CGTACCGATG CGGCAGGCCG TACCTGGCAG
TACGAGTATG ACAAAGAAAG TCAGCAACTG GTGTGCGTCA CGGCACCGGA CGGTAACCAG
TGGCAATGGT GGCTGGATGC GGATGCGCGG GTTATCCGCG AACGGGACAT GGCGGGTACG
GAGACCCACT ACGGCTATGA CGAAGACGGC CACTCCATCA CTGTTCGTAA CGGCGAAGGG
GAAATCCGCC ACTTCCTGTA CGACGGGCGT GGATTACTGA TAAAAGAAAC CGCGCCGGAC
GATACCTTGC ACTACCGCTA CGATGCGGCA GGCAGGCTGA TCGAAGTGGC ATCCTCCACC
AGTCATATCC AGCTGGCGTA TGACGAGCGT GACCGTGTGG TACTTGAGCG GAACAGTGGC
ACAGTCATCC GCCGTGATTA TCAGAACGCT ACACGTGAGG TCACCCGTAC CCTGCTTTGG
GATGAGGATA AGGACGGCGA CGACACGGCA CTCACCAGCA TTTTCCGCTA CCGCGCCACA
GGTGAACTGC ATCAGGTGCA GTTACCGGAT GGCGCGGAAC TGACGCTGGC TCACGATGCT
GCGGGGCGTG AGTCTTCCCG CCAAAGTCAG GCGGGCTTTA TGCAGCACCG TGAATACGAC
GCCATGGGCT GGCTGACGCG GGAAATGAGC GGCCAGACGG TGGACGGTCG CCTGCAGCCT
GTGCAGACCC GTGAATACCT CTACGACGGC GCAGGCAACC TGACCGGCAC TCGGCGCAAT
CGCGAAGCGG CAGGCTATCA ACTCGATGCC AGCGGACGGG TACTGTCAGT ACTGAGCGGC
GGCGCGGGGC GCACCGTCGA AACCGAAGAG CAATACCGCT ATACCCGCAG CGGTTTGCCG
CAGGATGCGA CAAGGCTGAC CGAATGGCAG GCCGGACGCC TGACTCAGCA GGACAACACT
CACTATCAAT ATGACAAGGC CGGGCGGCTC ATTCGCAAAC AGGTGGTGCA GCCGGGCTAT
CGGCCGCAGG TGTGGCACTA CCGTTGGGAC AGTCGCAACC AGCTCCGAGT GGTGGATACG
CCAGCAGGTG AACGCTGGTT CTACCGCTAC GACCCGTTCG GACGGCGCAT CGGCAAGCGC
TGTGAGCAAA CGCAGGATGA ACTCCGCTAC CTGTGGGATA GCGACCAGAT TGCCGACGTG
CGTCACCACC GCAACAACCA GCTTATCAGC CGCCGCCACT GGGTACATAA CGGCTGGGAG
CTGCTGGTAC AGCAACGCCA AAATACAGAC GGCAGTTGGG AAACGGACTT TGTGACCAGC
GGCCATAACG GCGAACCGCA GGCCATATTT AACAAGCAAG GTGATCTGCG CTGGCAGGCT
CCACGCACCA ATTTATGGGG GCAGCGCTAT ACAGATAATA CTGAAAGTCT TGATCCAGGA
CTGGCCTTTG CCGGGCAATA CCGTGACGTT GAAAGCAGCC TATGCTATAA CAGATTCCGC
TATTATGATC CGAGTGGTGG TTGTTATATC TCGCCAGACC CGATCAGTAT TTTGGGTGGT
GAGAATAACT ATGGATATGT GCAGAATCCG CTGGATTGGG TTGATCCGTT TGGGTTAACT
AGTTGTGAAC TAGCGAAAAA AATGGAGAAT GCGGGGACAC CTAGGCCAGT GAATTCGGCG
GCACACCATA TTGTAGGCGA AACGTCTAAA GGCGCTAAGC CTGCTAGGGA TATATTGAAT
AAACATAAAA TAGATATAAA TGGCTCTGAT AATGGAGTCT TTCTGCCAAA TAGAAATAAT
ACAGATGGGC TAGCAGGGAT ACTACATAAT GGTAGGCATC CAGACGACTA TCTAGCTGCG
GTAAATAGAA GGATTGAGTT GGCTGATATT TTAGGTGGGA AGTCAGAGGT CGTTAAAGAG
TTGGGTAGGA TTAGAGATAT TCTTTCTTCT GCTAATAGAA ATGCAAGCTG GAGTACAGTA
TTGTTATGA
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| Protein sequence | MRDDILARIA RVGAMHAGNR PTLPPDLPAP GSGSPPTSPG KPIKHSSFLG ALLGAVAGAL
VAAAVAAVAV ALVGVTGGLA IALVGGLAVL GAGSLISAVS GRVSAMVDSA SPPAGKVDSG
SPNVSVEGSP VSRAEVDVVL CTKHNGPQLI AQGSETVFVN GHPAARIGDK TVCGATIKDG
AATVFFGSGQ ATVLEIQDEF SGWQKALLIA VEFLVPPTRG LFRGLGKLFF RGPKAVMKGL
GAGALWAGKR FTQKTRCATR AFKANKGRAR VTQAAKAFKK DPVYIASGEV IESRTDIELG
QTLPLLFERT YRSASSRGGL AGRGWQDSWS EVATLSDDNG DTHVTITLAQ GYDIDFTFGI
GATVVYCAEY PEFKLVKRHN GFHLWHRDSQ TWRAFTVRQG DRLRLSAITD NHQNRIDFLR
DPKGYLRKVR HSDGIELLLV WQGKFLRQVQ RIDGGQKTVL AEYRQDEQGR LVEADAAHAY
HLFYDYDNQN RLIRWHDNDK TWARYEYDHQ GRCVYTTCAD GYLTANFEYL SDRVVMTDGL
GQRHEYGFNA LYLMAWEKSP LGHVTRYEYD EVGNLLREIS PAGRVVEFAY LDDTGLVSTF
TDGSGHAWQY AYDDHERLIG ITDPLGRNWA WQYDSKGNPL SLTGPDASEV RFAWNRYGLL
TEVSDQNGQV QASLYYDHRQ RLLSATDAES RTQQLRYDQQ DRLTTWTRPD GSTYRLGYRR
ASWKLPEQLL RPDDKQEQRQ YDKHNNLLNY TDGNGAVWAQ TYGPFDLLTS RTDAAGRTWQ
YEYDKESQQL VCVTAPDGNQ WQWWLDADAR VIRERDMAGT ETHYGYDEDG HSITVRNGEG
EIRHFLYDGR GLLIKETAPD DTLHYRYDAA GRLIEVASST SHIQLAYDER DRVVLERNSG
TVIRRDYQNA TREVTRTLLW DEDKDGDDTA LTSIFRYRAT GELHQVQLPD GAELTLAHDA
AGRESSRQSQ AGFMQHREYD AMGWLTREMS GQTVDGRLQP VQTREYLYDG AGNLTGTRRN
REAAGYQLDA SGRVLSVLSG GAGRTVETEE QYRYTRSGLP QDATRLTEWQ AGRLTQQDNT
HYQYDKAGRL IRKQVVQPGY RPQVWHYRWD SRNQLRVVDT PAGERWFYRY DPFGRRIGKR
CEQTQDELRY LWDSDQIADV RHHRNNQLIS RRHWVHNGWE LLVQQRQNTD GSWETDFVTS
GHNGEPQAIF NKQGDLRWQA PRTNLWGQRY TDNTESLDPG LAFAGQYRDV ESSLCYNRFR
YYDPSGGCYI SPDPISILGG ENNYGYVQNP LDWVDPFGLT SCELAKKMEN AGTPRPVNSA
AHHIVGETSK GAKPARDILN KHKIDINGSD NGVFLPNRNN TDGLAGILHN GRHPDDYLAA
VNRRIELADI LGGKSEVVKE LGRIRDILSS ANRNASWSTV LL
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