| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0648 |
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| Symbol | |
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| ID | 8529013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 687663 |
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| End bp | 689492 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_003258079 |
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| Protein GI | 261819973 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAAACA GTACAGGATT ACAGTTCACG GTAAAGGTCG GGGCATTGCC TGCATCAACC
TTTGCCGTGG TGGATTTTCA GCTCAGCGAG GCACTTAACC AGCCGTTTGC CCTGTCGCTG
AATCTGGCGA GTGCCTTGCC GGATGTGGAT TTCGGCGCTG TGCTCGACCA GCCGTGTGAG
TTGATGGTGT GGTATGAAGG CGTACTCCAA CGGCGAGTGA GCGGCATTAT CAGTGCCTTC
GCGCAGGGTG ACACCGGCTT TCGCCGCACG CGCTATCAGG CAGAGGTTCG CCCGGCACTG
TGGCGGTTGG GACTGCGTAC CAATGCCCGT ATCTTTCAGG CGCAAAAGCC GGAGGCCATT
ATCGGGACGT TGCTGGAAGA GTCTGGTATT ACCGATTATG CCTTTGCGCT ACGTCACGAC
CACGCCCCGC GCGAATACTG CGTACAGTAT CGCGAAAGTG ATTTGGCGTT TGTCACCCGT
CTGGCCGCAG AGGAAGGTCT GTACTTCTTC CATGAGTTTG AAGAAGGTAA GCACCGCGTC
GTCTTTGCCG ATGATGCCGG AGCGCTCAGC AAAGGCCCGG AACTGTTCTT CAACCTCGCC
ACGCAGGGAC TGAGCGAAGG CGAATACGTC CGCCGTTTCC GCTACGCCGA AGCCGTCAGT
ACCGCAGAAG TCGCCCTCAA AGACTACAGC TTCAAAACGC CCGCGTATGG CCTGCTGCAC
AGCAAAATAA GCGGAGAGCT GGCGCACCAG CGTGAAAGCT ACCAGCACTA TGACTACCCC
GGGCGTTTTA AACAAGACCC AAGCGGCAAG GCCTTTACCG GCTACCGGCT GGATGCGTTA
AGAGCGGGAG CGATGACCGG CTCCGGTGAA TCCAATGCCG CGATGTTGAT GCCCGGCAGC
AGCTTTACCT TAACCGAACA CCCCAACCCG ACGCTGAATA GTGGCTGGCA GTTGGTTGCC
ATCACCCACA GCGGGCAGCA GCCGCAGGCG CTGGAAGAAG AAAGCGGCGG TGAACCGACC
ACCTACAGCA ACAGCTTCGA GGTTATCAGT GCCAAAAGCA CCTGGCGTGC CGACCTGCCG
TACAAACCGA TGGTCGATGG CCCGCAAATC GCCACCGTGG TCGGCCCCGC CGGTGAGGAA
ATCTACTGCG ATGAATATGG CCGTATCAAA CTGCAATTCC CGTGGGACAG GTATGGCTCC
AGTGACGACC AGAGCTCCTG CTGGGTGCGG GTCAGTCAGG GCTGGGCCGG TGGTCAGTAT
GGCCTGATAG CCATCCCGCG CATCGGCCAT GAGGTGATTG TCAGTTTTCT GGAAGGCGAC
CCGGATCAGC CGATTGTCAC CGGCAGAACC TTTCATGCCA CCAACCCGGC ACCGTATCCG
CTGCCCGCCA ACAAGACGCG CACCTCAATC CGCACATCAA CCCACAAAGG CGCGGGGTTC
AACGAACTGC GCTTTGAAGA TCAGGCTGGG CAGGAAGAAG TGTTTATTCA TGCCCAGAAA
GACATGAACA CCGTGGTGCT GAATAATCGC ACAACCAGCG TGACCGCTGA CCACACTGAA
AGCGTCGGTG GCAATCAGGC GGTATCGGTG GTGAAAGACC AGTCCACTGA AATCCAGGGG
CAGCAGAGTA TCGCCGTGAC CAAAAACCGC AACACGGTCG TGGATGACAA CGACAGCCTT
CAGGTGAAAA ACAACATCGC TATCCAGTCG CAGAAGGGGG ACATCCTGAT AGCGACTGAC
AAGGGGTTTA TTGGTATCGG CGCGGACGGG GTCATCAACA TCAAGGGTAC CCACATTGTC
ATCAACGGCC AGCAAATCGA CCTGAACTGA
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| Protein sequence | MANSTGLQFT VKVGALPAST FAVVDFQLSE ALNQPFALSL NLASALPDVD FGAVLDQPCE
LMVWYEGVLQ RRVSGIISAF AQGDTGFRRT RYQAEVRPAL WRLGLRTNAR IFQAQKPEAI
IGTLLEESGI TDYAFALRHD HAPREYCVQY RESDLAFVTR LAAEEGLYFF HEFEEGKHRV
VFADDAGALS KGPELFFNLA TQGLSEGEYV RRFRYAEAVS TAEVALKDYS FKTPAYGLLH
SKISGELAHQ RESYQHYDYP GRFKQDPSGK AFTGYRLDAL RAGAMTGSGE SNAAMLMPGS
SFTLTEHPNP TLNSGWQLVA ITHSGQQPQA LEEESGGEPT TYSNSFEVIS AKSTWRADLP
YKPMVDGPQI ATVVGPAGEE IYCDEYGRIK LQFPWDRYGS SDDQSSCWVR VSQGWAGGQY
GLIAIPRIGH EVIVSFLEGD PDQPIVTGRT FHATNPAPYP LPANKTRTSI RTSTHKGAGF
NELRFEDQAG QEEVFIHAQK DMNTVVLNNR TTSVTADHTE SVGGNQAVSV VKDQSTEIQG
QQSIAVTKNR NTVVDDNDSL QVKNNIAIQS QKGDILIATD KGFIGIGADG VINIKGTHIV
INGQQIDLN
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