| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0647 |
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| Symbol | |
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| ID | 8529012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 687024 |
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| End bp | 687542 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | type VI secretion system effector, Hcp1 family |
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| Protein accession | YP_003258078 |
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| Protein GI | 261819972 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAACTC CATGCTATAT CAGCATCGAA GGGAAAACGC AGGGCAATAT CACCGCAGGG
GCGTTCACCT CTGACTCTGT CGGCAACATC TATGTGGAAG GCCACGAAGA TGAAATGCTG
GTGCAGGAAT TCAAACACGT TGTCACCGTA CCAACCGACC CGCAGTCTGG TCAGCCATCC
GGCCAGCGTG TCCACAAACC GTTCAAATTC ACCGTGGCAC TGAACAAAGC GGTTCCGCTG
ATGTACAACT CTCTGGCATC TGGCGAAATG CTGCCGACCG TCACACTGAA GTGGTATCGC
ACCTCGGTGG AAGGCAAGCA GGAGCACTTC TTCTCTACCA TCCTGACTGA TGCCACCATC
GTGGATATCG ACTGCAAAAT GCCACACTGT CAGGACCCGT CCAAGCTGGA CTACACCCAG
CTGATTGAAG TGTCGCTGGC CTACCGCAAA ATTGACTGGG AGCACACCGT TGCCGGTACG
TCCGGCTCTG ATGACTGGCG TGCACCGGTC GAAGCGTAA
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| Protein sequence | MPTPCYISIE GKTQGNITAG AFTSDSVGNI YVEGHEDEML VQEFKHVVTV PTDPQSGQPS
GQRVHKPFKF TVALNKAVPL MYNSLASGEM LPTVTLKWYR TSVEGKQEHF FSTILTDATI
VDIDCKMPHC QDPSKLDYTQ LIEVSLAYRK IDWEHTVAGT SGSDDWRAPV EA
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