Gene Pecwa_0645 details

Gene Information

• Locus tag: Pecwa_0645
• ID: 8529010
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 683808
• End bp: 685919
• Gene Length: 2112 bp
• Protein Length: 703 aa
• Translation table: 11
• GC content: 51%
• Product: TraG-family protein
• Protein accession: YP_003258076
• Protein GI: 261819970

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGACC GTTATGTGAT GGAGTCGTTG CTACGCCCTG CGGTTGAGTT ATATACAGCG 
ACAACGGCGT GGAGTGCGAC TTATATCTGT CTGACCGCTC CCTGGGCTGT TGCGCTTGCA 
CCGTCCGTTA GTTGGGTTAC GGCGGCTGGG TTCGGTGTGC TGGCTCTGAA ACGAACACGT 
CAGGGGCTAC AGATCCTTCG TTACCGTCGC AATATCCGGC GACTTCCCCG TTATGTGATG 
AGTAGTAAAC AGATCCCCGT GAGTAACCGT TATCTGTTTC TCGGGAGGGG ATTTCAGTGG 
ACGCAGAAAC ATACTCAGCG GCTCCTGGAA GCTCGTCGGC CAGAGACAGA GTGCTATGTT 
CAGCCATCCG TCATTTATCG TATGGCGCGT GACCTGGAGA AAAAACTTGA GTACAGCCTG 
CCATATCTCT GCCGGCTTAC TCAATCCGAC ACCGTCTTTA ACCCCGTCAG ACCGTTACCT 
CCCGTAGGGG GAAGCCCCAT CTATCACGGT GTTGAACCAG ATGAATCCGA TATTGCTTAT 
GATCTTGGGG AACGTGTAGG GCACTCGTTA GTTATGGGAA CAACGCGTGT GGGTAAAACA 
CGCCTGGCAG AATTATTGAT CACGCAGGAT ATCCGGCGTG GTGATGTCAC CATCGTATTT 
GACCCCAAAG GAGATGCTGA TCTGCTGAAA CGGATGTGGG CGGAAGCGCG GAGAGCTGGA 
AGGGAAAGTG AGTTTCATGT TTTCCATCTT GGCTGGCCAG ATATCAGCGC GCGTTATAAC 
GCGATCGGGC GTTTTAGCCG AATTTCTGAA GTGGCTTCTC GTGTTGCTGG TCAGCTTTCA 
AGTGAAGGTA ATTCGGCTGC TTTTAAGGAG TTTGCCTGGC GATTCGTCAA TATCATTACA 
CGGGCGCTGG TTGCCCTGGG CCAGCGGCCT GATTACAGCC TGATACTCCG TTATGTCACC 
AATATAGGCG ACCTATACGA AACCTATGTC GAAAATCTGT TAAGCACTCA AGCTCCACAA 
CTGTGGGTCA CGGTGGAGAA CTTACTTAGC TCAGGCATGC TCAATGAGCG GGATCTTCCC 
CGAAATATGC AAGGGCAAGC GAACGCGATG AAAGTGTGGG CCATCGAGAC CGTTCTTGGT 
AGTGATGAAG GTAAAAAAAT ATGGGATCCG GTTCTGGATG GATTGCGGTC GGCCGTACGT 
TATGACCGGA CCTATTTTGA TAAAATTGTG GCGTCGTTAT TGCCCTTGCT GGAAAAACTG 
ACGACGGGAA AAACAGCGGC TTTACTGGCA CCTGATTACA CCGATATGGA TGATCCTCGG 
CCCATCTTTG ACTGGCAGGA AGTCATTCGA AAACGAGGAA TTGTGTATGT CGGACTCGAT 
GCGCTATCGG ATGCGGAGGT CGCCTCAGCG GTAGGAAACA GCATGTTTGC AGACCTGGTA 
TCTGTTGCCG GGTACATCTA CAAGTTTGGT ATCGGCGGTG AAGCTCCACA GAAAAAAATC 
CCCATTAACC TCCACTGCGA TGAGTTTAAC GAACTGATGG GTGAGGAGTT TATACCGCTC 
ATTAACAAAG GCGGCGGCGC AGGGATTCAG GTAACTGCCT ATACACAGAC CTTGTCGGAT 
ATTGAAGCTA GGATTGGCAG TAGTGCCAAG GCCAACCAGG TGATTGGTAA CTTCAACTCG 
TTAATCATGC TACGGGTTAG AGAAAATAGT ACAGCGGAGT TGCTGACCAG CCAACTTCCT 
GAAGTGGATG TCTATACCAA GACGCTGGTT TCCGGCGTAA CGGATATTAC TAATCCTGAC 
CAGGGTTCTG ACTTTACCAG TAATGTTCAG GATCGTGTCA GTAATGTCAG GATGCCAATG 
ATTACCCCAG CTGACATTAT CAACCTACCG AAAGGGCAGG CGTTTGCATT GCTTGAGGGG 
GGGCGGTTGT GGAAAATCCG TATGCCATTA CCTGATAGCG CAAATGACCC GTTTATGCCG 
GAGAGTATCA GCCGCATTGC CGAGTACATG CAGCAGAATT ACCGCACCGG CGAAACCTGG 
TGGACGGGGA GTACATTGCC TTCTGATAGC CTCACAGGAT CTGCCTTTGA GCCAAAAGAT 
GAGGTGGCGT AA 

 

Protein sequence

MSDRYVMESL LRPAVELYTA TTAWSATYIC LTAPWAVALA PSVSWVTAAG FGVLALKRTR 
QGLQILRYRR NIRRLPRYVM SSKQIPVSNR YLFLGRGFQW TQKHTQRLLE ARRPETECYV 
QPSVIYRMAR DLEKKLEYSL PYLCRLTQSD TVFNPVRPLP PVGGSPIYHG VEPDESDIAY 
DLGERVGHSL VMGTTRVGKT RLAELLITQD IRRGDVTIVF DPKGDADLLK RMWAEARRAG 
RESEFHVFHL GWPDISARYN AIGRFSRISE VASRVAGQLS SEGNSAAFKE FAWRFVNIIT 
RALVALGQRP DYSLILRYVT NIGDLYETYV ENLLSTQAPQ LWVTVENLLS SGMLNERDLP 
RNMQGQANAM KVWAIETVLG SDEGKKIWDP VLDGLRSAVR YDRTYFDKIV ASLLPLLEKL 
TTGKTAALLA PDYTDMDDPR PIFDWQEVIR KRGIVYVGLD ALSDAEVASA VGNSMFADLV 
SVAGYIYKFG IGGEAPQKKI PINLHCDEFN ELMGEEFIPL INKGGGAGIQ VTAYTQTLSD 
IEARIGSSAK ANQVIGNFNS LIMLRVRENS TAELLTSQLP EVDVYTKTLV SGVTDITNPD 
QGSDFTSNVQ DRVSNVRMPM ITPADIINLP KGQAFALLEG GRLWKIRMPL PDSANDPFMP 
ESISRIAEYM QQNYRTGETW WTGSTLPSDS LTGSAFEPKD EVA