| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0474 |
|---|
| Symbol | |
|---|
| ID | 8528838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 513802 |
|---|
| End bp | 514932 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | secretory lipase |
|---|
| Protein accession | YP_003257918 |
|---|
| Protein GI | 261819812 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCATG TGCCTAAACT AAAGCAAAAA CCCTTAGCGT TACTTCTGGC TATTTCTGTC
GGGATGATGG CTCCGCTGAC TTTTGCTGAG ACGAAAACGC CGGGCACCCT GATAGAAAAG
ACGACGTTGG ATACGAAAAA CGGCCTCATG GAGGCAGGGG AACAATATCG GATCCAGTAT
TATTCGAAGA GCGGGGTCGA TGGCAAAAGC CTACGGGAAG ACACCGGCGC GGTTTTCATC
CCCAAAGGTG AGGCACCAAA AGAGGGTTGG CCGGTTGTGG TATGGACACA TGGGACGATT
GGCGTGGGCG CCTCCTGCGC GCCTTCTCTC AATCCGCGTT CCGCTCGGGA TGCTCAGTAT
CTGAATACTT GGCTGTCGCT GGGTTTTGCT ATTGTGGCAC CGGACTATGC GGGGCTTGGG
TCTGCTGGCT TGCATCACTA CCTCAATTCA CGTGGTGAGG CATGGAGCGT GTTGGATAGC
GTCAAAGCAT CACTGACCAC ATTCCCGCTG CAAAATAAGT TGACGATCGT CGGCCAGTCG
CAAGGGGCAC ACGCGGCTTT TGCGAGTACG GGCTATCAAC CGGGTTATGC TCCGAACCTG
AACATCGCAT CGACCGTATT GACTGGCACG CCCTATTTTG ATGATAAAAC CTCGGCGGCA
GAACTTTTTG CCGGGGGAAG CACAGAGGGC GGCGATCCTA AAATCCCTTA TGTGATGTAT
ATCTACCTGT CAGCAGCCGA TGTAAATAAA GGGCTTAATG TCGATGATTA TTTCACGCCG
AAAGCGGCTG CCCTTGTAGA GGATGCTCGT ACAATGTGTA TCGGCGAACT GACGCAAAAA
GTGATGGATG AGGGGCTGAA TGCTGCCAAT AGTCTGAAAC CAGCGATCCA GCAATTACTG
GATAGCCAAA CCGCGAGTTT GCGCTATAAC ACACTCCATG TTACCCCTCC CGTCTTTATC
GGGATTGGAA CCAATGACAT CAACGTGCCT ACCAAGATGC AGGTTCACTT TGCGGAAGAT
GTCGTGAGTG CGGGGACGTC AGCCGATGTG CACGAATATA AAGGCATGAA CCACAGCGAA
ACGGTTAACG TTTCACTGCG TAATTCTGTT CCCTTCGTGT TGGGAAAATA G
|
|---|
| Protein sequence | MFHVPKLKQK PLALLLAISV GMMAPLTFAE TKTPGTLIEK TTLDTKNGLM EAGEQYRIQY
YSKSGVDGKS LREDTGAVFI PKGEAPKEGW PVVVWTHGTI GVGASCAPSL NPRSARDAQY
LNTWLSLGFA IVAPDYAGLG SAGLHHYLNS RGEAWSVLDS VKASLTTFPL QNKLTIVGQS
QGAHAAFAST GYQPGYAPNL NIASTVLTGT PYFDDKTSAA ELFAGGSTEG GDPKIPYVMY
IYLSAADVNK GLNVDDYFTP KAAALVEDAR TMCIGELTQK VMDEGLNAAN SLKPAIQQLL
DSQTASLRYN TLHVTPPVFI GIGTNDINVP TKMQVHFAED VVSAGTSADV HEYKGMNHSE
TVNVSLRNSV PFVLGK
|
|---|
| |