Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0433 |
Symbol | |
ID | 8528796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 462948 |
End bp | 469985 |
Gene Length | 7038 bp |
Protein Length | 2345 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | filamentous hemagglutinin family outer membrane protein |
Protein accession | YP_003257882 |
Protein GI | 261819776 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.365206 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAAGT ACCTGTATCG CATCGTTTTT AACCGCGCTC GCGGCGTGTT GATGGTGGTC TCTGAACTGT GTCGCGGCTG CGTCAAACAT TCCGCGCCGT TGGGCCTTGG GCCGACGCTG AGTCAGATAA CCGGGCGACT CTCTCCACTG ACGTTCCTAT TGCTGGGGGT GATGGGATTT GTCACGCTTG CGCCTGTGGC ACAGGCGAAC ATTGTCGCGG ACGGCAATGC GCCCGGTAAC CAAAAACCTA ACATCTTACA AACGGCAAAC GGGACGCCAC AGGTCAATAT TCAAACGCCA AGTGAAGGAG GCGTATCGCG CAATGTCTAC AGCCAGTTCG ATGTGAATCA GCAGGGTGCC ATTCTCAATA ACTCGCGTAA TCAGGTGCAA ACACAGCAAG GTGGTTGGGT TGCGGGTAAC CCGTGGCTGG CTAAAGGTGA AGCAAAGATC ATTCTGAATG AAGTGAATTC ACGCGATCCC AGCAAATTAA ACGGATATAT CGAAGTCGCA GGGAAAAAAG CACAGGTCGT CATCGCCAAC CCGTCTGGCA TCACCTGTGA CGGCTGCGGT TTCATCAATG CGAACCGGGC GACGTTGACG ACCGGCAAGG CGATGATGGA AAACGGTCAA CTTAAGGGCT ATCAGGTTGA GAGAGGCACT ATTCGCGTTC AAGGGGCGGG GATGGATTCC AGCCGTCAGG ATTATACCGA CCTGATCGCA CAGAGTGTAG AAATCAACGC CGGGCTATGG GCGAACGATC TGAAAGTGAC GGCAGGGCGC AATACCGTTG ATGCCGAGCA GCAGAAAATT GAGAAAGCAG CGACGGCCTC AGCGTCAACG GCTAGCACAG AGCCGAAGCT GGCGGTGGAC GTAGCACAAC TCGGCGGTAT GTACGCGGGT AAAATCCAGC TCATTGGTAC GGAGAAAGGC GTTGGGGTAC GCAACGCGGG GGCGATTGGC GCACAGGCAG GAAGCGTAAC GATCTCTGCC GATGGCCGCA TTGAGAACAG TGGCAGCATT AATGCCTCAC AGGATGTACA ACTGACAGGC CGTGAACTGG ATAATAGCGG TAAGGTTTAC GCCCAGCGTG ATGTCGGTGT CAGCACACGG CAACAGACCG CTAACCGTGG CGTACTGGCT GCGCAGCGCA ATGCGACAGT GAAAGCAGCA AATATCACCA ACCAGAAAGG CGCAGTGCTG GGGGCGGGAA TCAACAGTGA CGGCTCGGTG GCGCAAACGG GCAATCTATC TCTGACAGCT AGCCAGCGTG CTGATGCTAA CGGTCAGCAA CTTGCGGGCG GGTCGCTGAC AATGGCGGCG GCAGAGGTGA ATACCGATGG CGGTCAGACG CAGGCGACCG ATGTTACGCT CAATGCCACC AGTGGATCGG TTTCCAGCCG TAAAGCGAAA GTCAGCGCGG ATAACACCCT TAAGGTGACG GCGGCGAAAG CCGTCAATAA TACCGACGGT ACGCTCATTG CCGGGAAAAA GCTGGATGTA CAAGCCGATA GCCTGAGCGG CGACGGCCAA CTGTTGTCAC TGGGTGACAT GTCGCTGACT GCCGCACAGC GCTTCGATAA CCAGAGCGAT GTCATTGCAA ACGGTAAACT CGACCTCTCG GTGGCAGGGG ACGTCACCAA CCGCCAGAAA ATTCAGTCCG GCAGCGAACT GACGCTGACG GCAGCACGTC TCGATAATCA GGCCAATGGT GAAATCAGTA GTCAGAAGAC GCGGTTGGCA CTGTCGGATT CGTTAACCAA CCGTGGCCTG ATCGATGGGG GGCTAACCCG TATTGATGCG GGCATGCTAA ACAATATCGG TAGCGGTCGC ATTTATGGCG ACGGGATCAG CCTGCAAGCG CAGACGCTGA ATAATCTGAA TGAAGCTGGC ATGGGGGCGA CGATCGCCGC ACGCCAGCGT CTGGATCTGG GCGTTGGTAC GCTCAACAAT CGTCAACACG GCCTGATTTA TAGCGATGGC GTGATGGCGT TGGGACGTAA TCTGGATGCG GAAAGTAGAG CGACAGGCCA GGCTGATGCC ATCAATAACC ATAGCGCCAC GATTGAGTCC ATTGGTGATA TGACGTTGTC CGCTGGCCAG ATTAATAACG TTAACGATAA TTTGGTGACG GAAATCGTTA CCAGCGCGAC CCACATCGAT GAAGCCGTAC TGCGTGGACA TACCACACGC TACAACTGGA GCGATATTTG GCTGACAGAC AATAAATACG GTGTGAACAC TGCACATATG CCGGATGGCT ATGCCAGTGA GGACTTCTAT CGCTACATCT ATACCCGAAC GGTGAATGAA ACCCGGGTGA AAGAGAGCGA TCCGGGGCAG ATTCTGTCTG GTAATAATCT GTATCTGACA GCGGCACGGA TGACCAACAG TGATAGCCGT GTGATTGCGG CAGGTCTGTT GATTGACGGT GTGAAGGAGC TGAGCAATCT GGCGACGCCG GGCGAACGTA CTACGTCTGA GAGTGGGTGG CAGGAACGCT GGTATGCCAA AAAGAAAAAG AACTGGCGCG GGGTAACAAA AACCTCACAG GGGATTGACG GTAATAACTA TGCCCCAGCC GCGCAAGTCG AAACGATCGA TCTAAAAGTG CATGACTGGC GCGATCAGGC TGCATTTGAC GGTTCGGGTT ATGTAGTGAC GGCGCTGCGT GCCAACGGCG TTAATCAACA GGTTGGTTCG CCGACGATCA ATTTGCCAAA CAGCAGTCTA TTTACGCTGC AACCCGCCGC AGAAAGCCGC TATCTGGTGG AAACGGATGC GCGCTTCACC AACCAGAAAC AGTGGCTTAG CTCTGATTAT ATGCTTCAGG CCTTCAGTAT CGAGGGGCAG GATAAACGAC TAGGCGATGG CTTCTACGAA CAGCGAGAAG TACGCGAACA GATCGCCCAA CTAACCGGGC AGCGCTATCT GGCGGGTTAT AACAGCGACG AAGCACAGTA CAAGGCATTG ATGAATGCGG GTATCGCATT TGGTCGTCAG TTCTCATTGA CGCCGGGTGT AGCGCTGACG CCGGAGCAGA TGGCGTTGCT CACCACCGAC ATGGTCTGGA TGGTGAGAAA ATCGGTGACC TTGGCAGACG GATCTTCACA GACTGTACTT GCTCCACAGG TTTACACCAA CGTCCGCTCG AATGAACAAA TCGGTGCGGG TAGCCTGCTA GCAGGGAATA CGATCTCTGT TGGGCTAGCG GGTGGAATGC TGAACAGCGG ACGTATTGCC GCGCGCGATA CCCTGTTTAT CTCGTCTGAT GCGTTGGACA ATCAGGGAGG TTCTCTGCTG GGTAAACAGG TGCAGCTACA GGTTCGTACT GATCTGAATA ATGTCGGTGG CGTCATTCAG GCGGAAGATA AATTGACCGC ACTGGCGGGC GGCAATATCA CCAGTACCAG CACGTTGAGT GGCGGTGAGG ATAATCGCAT TCTGGATCGC ATAGCGGGTA TGTATGTTCA GAATGATAAG GGTGAACTGA CGCTGGCGGC CAGCAAAGAT ATCAACTTGA TCGGTAGCCA AGTGATTAAC TCGGGGGCCG ACAGTTCCAC GCTGATCAGC GCGGGGAATA ACCTGAACCT GGCGACGCTG ACGACCACGG AAACGCAGAA TAGCGACTGG GACAGCAATA ATTATCGCCA TTATCAGGCG AGCAAAGATA TCGGTAGCGA AATTGCCGCC AATGGTCAGA TAGCGTTACG CGCGGGACAA AATCTGAATG CGACGGCGGC ATCCGTCACC GCGCAGCAGG GGTTACAGGT TCAGGCGGGC AATGACATCA ATCTGACCAG TGGTGAGTCA TCCTATACGT TGACGGAGCA CAGCAAGCAA AGCAGTCGCG GTCTGCTCTC TGCGCAGTCC AGTGAACGCC ATGACAGCAT TCAGCACCAA TCGGCGGTGG GGAGTTCGTT CAGCGGCGGG ACAGTGGCGA TCGGTGCTGG CAATAACGTG CAGATCGTGG GTAGCTCCGT TGCGGGTACG CAGGATGTCA GCATTACCGC CGGGCGCGAT ATTACCGTGA CGACGGCGAA TGAAAATCAT CAGGAAACTC ATTTAAAGGA AGAGAAAAAA TCCGGTCTGA TGGGCAGTGG CGGTATCGGA TTTAGCATTG GGCAGGCCAG CCAAAAGAGC ACGACCGATA CCGATGGCAT GAGTGAGAAA GCCAGCATCA TAGGTAGTGA AAAAGGCAAC ACGACGCTGC TGGCGGGTAA TCAACTGACC GTGAAAGGTA GTGACGTGGT TGCCGGACAG GATCTGGCGC TGCAAGGTAA GACGCTAGCG GTGACGGCGG CGGAGAACAG TCAGACGCAG CGGCAGACCT ATGAACAGAA GCAGAGTGGG TTAACGCTGG CGCTGAGTGG CACGGTCGGC GGTATGGTGA ATACAGCGGT ACAAACGGCG CAGACGGCTA AGGAGACGGA GGATAGCCGT CTTCAAGCTT TGCAGGGTGT GAAAGCGACA CTAAGTGGCG TACAAGCGGG GCAGGCTGCC TATCTGGCTG CGCTGAAAGG TAAAGACGAT CCTACGAATA ACAATGTTGT GGGTGTCAGC GTCTCGCTGG GAAGCCAGTC ATCTAAATCC GAGCAAACCG TGGAGCAGCG CACCGCGCAA GGCAGCAGCC TGAACGCTGG GAGGAACCTG TCTCTGACCG CAACGGGTGA TGATATTCGG GTGCAGGGAA GCGAGCTGCG CGCGGGTCAG GATGTGGCGC TGGATGCGGC TCGTGATATC CAGCTAGTGT CCGCGCAGAA CAGTCAGCAC ACGGAAGGAA GCAACAAGAG TAAAGGTGGC AGCATTGGCC TGAGCCTTGG TGCTGGCAGC GGCGGCTTTA GCCTGAGCGT AAACGCCAGC ATGAACAAAG CGAAAGGCAA CGAACTGGGT GAAGGGCTGA GCCACACTGA AACGCTGCTG GATGCGGGGC GTCAGGTACG GCTAAACAGC GGTCGCGATA CCACATTGCA GGGTGCACAG GTCAGCGGGC AGCAGGTAAC GGCACGCGTC GGACGCGATC TGCTGTTGCG TAGCGAGCAG GACAGCGACG TGTATAACAG CAAGCAGCAG AGCATGAGTG CAGGCGTCAG CATTCCGATT TATGGTGCGG GAAGCGCGTC AGCCAGTTTC AACATGAGCA AGGACAAAAT GCACAGCGAT TATCGCAGCG TGCAGGAGCA GACCGGGCTG TTTGCCGGAC AAGGTGGCTA CGATGTACAG GTGGGCAACC ATACGCAGCT TGATGGTGCG GTGATTGGCT CCACGGCAGA GGCTGCGAAA AACCGATTAG ACACCGGGAC GCTAGGCTTT AGCGATATTG AAAACCGAGC AGAGTTTAAG ACCTCGCATA GTGGCGTCGG TATCAGTACT GGCGGGCCGG TAGGCATGCA GATGCTCAGT AACTTGGCAT CCAACTCGCT GATAAGTGGA AATAATGACG GTAATGCGGC GAGTACCACG CGTGCGGCGA TCAGCAATGG ACAGCTAGTC ATCCGTGATG AGGCCAACCA GCGTCAGGAT GTTGCACAAC TGAGTAACGA TGTCGAACAT GCAAACCAGA CGCTGAGCCC GATTTTTGAC AAAGAGAAAG AGCAGAAACG CCTGCAACAA ATGCAGGTGA TTGCAGAAAT CAGCAGTCAG GTGATGGATA TTGCCGGTAC GCACGGGGCA ATCATTGCGA CGAAAGCGGC GAAAGCGGAG GCCGATGCGA AGGCCGCAGG TCTCTCTGAT GCTGACAGGA AGATGGCGAG AGACGCGCTT GCGACAGGTA ATAAGCCGAA CCTGAACCCG ACAGAGGCCG AGATTCGGCA ATATGTTTAT CAGACGGCGT ATGACAAAGC TTATACTCAG GCCTTGAACA GTTCGGGTCT TGGCACGGGT GGTGCGATCC GTCAGGGTAT AATGGCGGTC TCGGCGGCGG TGCAGGGACT GGCGGGGGGT AACGTTGCAC AAGCGATAAC GGGTGCAGCG GCGCCGTATC TGGCGGCAGA AATCAAGAAA GCGACGACGG ATGCAAATGA TAACGTCAAT ATTGCAGCCA ATGCGGTAGC GCACGCGGTG CTGGGCGGGA TAGTGGCGGA AGCCAGCGGT AACAGTGCGC TGGCGGGTGC TGCGGGTGCG GCGACGGGTG AGCTAGCGGC GCGAGTCATT GCCGACAGGC TATACCCGGG TAAAGCCATC TCGGAGATGA CGGAAAGCGA AAAACAGACG GTCACCACGC TTTCGCTTCT GGCAGGTGGT CTGGCGGCCG GCACGGTGGG TGATTCGACG ACGAATGCGG TAGCGGGTGC GCAGGCAAGT CAGAATGCGG TGGAGAATAA CTATCTGTCC AGTGATATGT ATGCACTGAA CAGAAAAGTG AAAGCAGCTA AAGAAAAAGG AGAAGATATT GCGCCCATTC TTGAAGAGGC ACGCGAGCAG GCAGAAAAAG ACAGGGAAAA ACAGGCTGCA TCCTGTCATG ACCGCCCTGA TATGTGTGCA TTTGGCCGCG ATGTAGCAAA TGATGCTTAT AGTTCATATC TTGAAAACGG ATTCCTCCAG GGGATTGATT CAGATGTTGC CAGATTTGTA CAGCAGGAAA CGGCGAAAGA TAATGCAGTC ATAGACCGAT ATGCCAGTGA GTTTGGTAAA GGTCTGGCTG TTGCTTCTGA GGGGGCCGCT TTGCTAGCTG GAGCTGGAAT CAGTCTTATT CTTCCGGGAG GTAAAGGTGG CCCGGTAAAT ATAGCAACTG GTTTTAACAA GTCACCTCAG TCTATATGGG GACGTTCAAC TAACGAAATA GTCAAAGATT TTCAGTCTGC TGGTTATCAA GTTAATGTAC GACAATCTAC GAGAGGTTCT GGTCAGGCTG TTATTATTGA AGTGAAAGGG CATCCTGAAA TTAGCCAAAT TCAATATCAC CCCGGCGGGG GGCGTCATGG TGGAAGTTAC TATAAGATCT CAACCACAAC GCAGGGTACT GTAAAAGTTG TTGATCCTAG TACATATAAC CCTACTCAGG GAGAAAAAGC CACAATCATT GATAAGCCTA AAAAGTGA
|
Protein sequence | MNKYLYRIVF NRARGVLMVV SELCRGCVKH SAPLGLGPTL SQITGRLSPL TFLLLGVMGF VTLAPVAQAN IVADGNAPGN QKPNILQTAN GTPQVNIQTP SEGGVSRNVY SQFDVNQQGA ILNNSRNQVQ TQQGGWVAGN PWLAKGEAKI ILNEVNSRDP SKLNGYIEVA GKKAQVVIAN PSGITCDGCG FINANRATLT TGKAMMENGQ LKGYQVERGT IRVQGAGMDS SRQDYTDLIA QSVEINAGLW ANDLKVTAGR NTVDAEQQKI EKAATASAST ASTEPKLAVD VAQLGGMYAG KIQLIGTEKG VGVRNAGAIG AQAGSVTISA DGRIENSGSI NASQDVQLTG RELDNSGKVY AQRDVGVSTR QQTANRGVLA AQRNATVKAA NITNQKGAVL GAGINSDGSV AQTGNLSLTA SQRADANGQQ LAGGSLTMAA AEVNTDGGQT QATDVTLNAT SGSVSSRKAK VSADNTLKVT AAKAVNNTDG TLIAGKKLDV QADSLSGDGQ LLSLGDMSLT AAQRFDNQSD VIANGKLDLS VAGDVTNRQK IQSGSELTLT AARLDNQANG EISSQKTRLA LSDSLTNRGL IDGGLTRIDA GMLNNIGSGR IYGDGISLQA QTLNNLNEAG MGATIAARQR LDLGVGTLNN RQHGLIYSDG VMALGRNLDA ESRATGQADA INNHSATIES IGDMTLSAGQ INNVNDNLVT EIVTSATHID EAVLRGHTTR YNWSDIWLTD NKYGVNTAHM PDGYASEDFY RYIYTRTVNE TRVKESDPGQ ILSGNNLYLT AARMTNSDSR VIAAGLLIDG VKELSNLATP GERTTSESGW QERWYAKKKK NWRGVTKTSQ GIDGNNYAPA AQVETIDLKV HDWRDQAAFD GSGYVVTALR ANGVNQQVGS PTINLPNSSL FTLQPAAESR YLVETDARFT NQKQWLSSDY MLQAFSIEGQ DKRLGDGFYE QREVREQIAQ LTGQRYLAGY NSDEAQYKAL MNAGIAFGRQ FSLTPGVALT PEQMALLTTD MVWMVRKSVT LADGSSQTVL APQVYTNVRS NEQIGAGSLL AGNTISVGLA GGMLNSGRIA ARDTLFISSD ALDNQGGSLL GKQVQLQVRT DLNNVGGVIQ AEDKLTALAG GNITSTSTLS GGEDNRILDR IAGMYVQNDK GELTLAASKD INLIGSQVIN SGADSSTLIS AGNNLNLATL TTTETQNSDW DSNNYRHYQA SKDIGSEIAA NGQIALRAGQ NLNATAASVT AQQGLQVQAG NDINLTSGES SYTLTEHSKQ SSRGLLSAQS SERHDSIQHQ SAVGSSFSGG TVAIGAGNNV QIVGSSVAGT QDVSITAGRD ITVTTANENH QETHLKEEKK SGLMGSGGIG FSIGQASQKS TTDTDGMSEK ASIIGSEKGN TTLLAGNQLT VKGSDVVAGQ DLALQGKTLA VTAAENSQTQ RQTYEQKQSG LTLALSGTVG GMVNTAVQTA QTAKETEDSR LQALQGVKAT LSGVQAGQAA YLAALKGKDD PTNNNVVGVS VSLGSQSSKS EQTVEQRTAQ GSSLNAGRNL SLTATGDDIR VQGSELRAGQ DVALDAARDI QLVSAQNSQH TEGSNKSKGG SIGLSLGAGS GGFSLSVNAS MNKAKGNELG EGLSHTETLL DAGRQVRLNS GRDTTLQGAQ VSGQQVTARV GRDLLLRSEQ DSDVYNSKQQ SMSAGVSIPI YGAGSASASF NMSKDKMHSD YRSVQEQTGL FAGQGGYDVQ VGNHTQLDGA VIGSTAEAAK NRLDTGTLGF SDIENRAEFK TSHSGVGIST GGPVGMQMLS NLASNSLISG NNDGNAASTT RAAISNGQLV IRDEANQRQD VAQLSNDVEH ANQTLSPIFD KEKEQKRLQQ MQVIAEISSQ VMDIAGTHGA IIATKAAKAE ADAKAAGLSD ADRKMARDAL ATGNKPNLNP TEAEIRQYVY QTAYDKAYTQ ALNSSGLGTG GAIRQGIMAV SAAVQGLAGG NVAQAITGAA APYLAAEIKK ATTDANDNVN IAANAVAHAV LGGIVAEASG NSALAGAAGA ATGELAARVI ADRLYPGKAI SEMTESEKQT VTTLSLLAGG LAAGTVGDST TNAVAGAQAS QNAVENNYLS SDMYALNRKV KAAKEKGEDI APILEEAREQ AEKDREKQAA SCHDRPDMCA FGRDVANDAY SSYLENGFLQ GIDSDVARFV QQETAKDNAV IDRYASEFGK GLAVASEGAA LLAGAGISLI LPGGKGGPVN IATGFNKSPQ SIWGRSTNEI VKDFQSAGYQ VNVRQSTRGS GQAVIIEVKG HPEISQIQYH PGGGRHGGSY YKISTTTQGT VKVVDPSTYN PTQGEKATII DKPKK
|
| |