| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0347 |
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| Symbol | |
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| ID | 8528710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 385930 |
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| End bp | 390069 |
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| Gene Length | 4140 bp |
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| Protein Length | 1379 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | |
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| Product | YD repeat protein |
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| Protein accession | YP_003257807 |
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| Protein GI | 261819701 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAAG CTGCGCGCGT TGGCGATGGA ATAGGACACT CCAGTGCTCT GACTGGCATG
ATCCTGGGCA CCATCGCTGG CGGATTGATT GCTGCCGCCG GCGGTATTGC GGCCGGTGCT
CTGCTTGTGG CGGGGCTGGG CTCCTGTGTG GTGGGTGGCG TGTTACTGAT TGGCCTCAGT
GCTGCGGTGG GGTGGGCGAC GGGCGAGCTG GCAGAAAAGG TTCGTGACGG CATTGCCGAC
TCCTTTGCCA GCAGCATGTC AAAGGCCGGC ACGATTGACG AGGGCTCACC CACGGTCTTT
ATCAACGGCA TGAAGGCCGC CATGGCTATC CTGAGTATAG CCAGTTGCAA TAAAGACGGC
CCTTCCATGC AGGTGGCGGA GGGCTCCGCA ACGGTCTACA TCAACAACCA GCCCGCCTCC
CGTCTGGGGG ACAAGGTGAA CTGCGGTGCC ACTATCACAG AAGGCTCATC CAATGTGTTC
ATTGGGGGGG CGACGAAACC CATGCTGCCA ATCCGGTCAG AAGTGCCGGC CTGGCTCTAT
AAAGCCTCTG ATTTAACGCT GCTTTTCGCC GGGCTGGTTG GCGGGGTGGG GGGCATGGCG
GGCAAAGCCG GAAAACTGGG TAAGCTGCTG CGGGAACTTC CCGGTCTCAA CAAGCTCCAG
CGTCTTGCCT GCCGTTTTGG CGTACTCATG ACCAGTATCG CCGCCGGGGG GATTATTGCC
CGCCCAATCG ACATCGTGAG CGGGCAAAAA TTTCTGGCGG ATGAGGAGGA GCTGGATTTC
GTCCTACCTT CCCGCTTGCC CGTCTATTGG CAACGCTGCT GGCGTAGCGG CAATCCCGGT
GATAGCGTAT TGGGAAAGGG ATGGAGCCTG TTCTGGGAAA CGACACTGAC CTGCTATCAG
GACGGTCTGG TCTGGCGCGC CCCGTCAGGC GATCTGATTT CCTTTCCTTT TGTTCCCGTC
GGCCAGCGAA GCTACTGTCC GGCAGAAAAG CGCTGGCTGG AGCACCATCA GGATGAAAGC
TGGTCGGTTT ATGGGCCGGA CGGCGAAGTA TGGTCTTACA CCGCTTTGTC TCCACAGGGG
AAAGCGGTTC TGGCACGCAT TGCCGAACCG TGTGGTCATG ACATTCTCTT TTTCTGGAAC
GATGATGACA CGCTTCAGGC GCTAACGGAT AGCGCCGGAC GGCACCTCAC CTGCCGGTAT
CGTGACGGGC GACTGGACAG TGTCTGGCTG GATGAATCGA CCTGTCTGGT GCACTATACC
TACAATGCGC AAAGGCAGTT GATTACCGTC ACCGGGCGGG GCGGTAGCGT GCGCCGTCGT
TTTACTTGGC ACGATGACGG GCTGATGGCC AGCCATGAAG AGGCGAGCGG CCTACTCAGC
GAATATCAGT GGCAGGAGAT TGCCGATTTA CCGCGTGTGG TGGCCTACCG CAACAGCGCG
GGTGAGCAGC TTACGCTGGA GTATGATTTC GCCGGACAAC GGCGAACCGC CCGCCGAGAG
GATGGTCTCA TCGCGCAGTG GTTACTTGAC GACGAAGGTC ACGTCACTCA CTTTACCGAT
TACGACGGCC GTGAGACCAC TCTGAGTTAT GCCGATGGCG AACTGTGTGA CGTCATCATG
CCCGGTGGGG CGAGCCGCAA AACGACCTGG GACGATTATG GTCGTTTACT CAGCGAGACC
GATCCGCTGG GTCGGGAAAC TTGCTACCAG TGGTATCGGC TGACGGGTCA CATTACGCTG
GTCACGTATC CCGACGGCAG CCGCGAGCAA ATGCAGTATG ACGACCTCAA TCGTCTGGTT
GAGGAAATTG ACGCACGGGG TAACTCAACT CGCTACCAGT ACCCCACGGC ACAGGAAAGT
TTGCCGGACA GCATCACCGA CGCACTGGGC GGCACCGTCA CGCTGGTCTG GAACCGACAG
GGGCTGCTTA CGGCACGTAC CGACTGTTCC GGGCAGTGCA GCACCTTTGA GTATGACCAT
GACGGGCAGT TGCTGGCATC TGTTGATGCC GAAGGTCACA CCACCCGCCG GGAATGGGAT
GCCTGCGGGC ACCTGACAAG CGTTATCTAC CCGGATGGTC GCCGGGAAAC ACTGCGCTGG
AATGCCCGGG GTCAGTTGCA GGCCTGGCGT GACGCACAGA ACAGCGAAGT CCGCTGGCAC
TATAACGTCC TCGGCCAGCC CGTCAGTGTA ACGGACCGTC TTCGCCGGAC AACGCGCTGG
CACTATGACG CTCGCGGGTT GCTGTTACGG CTGGAGAACG GCAACGGCGC AGCGTACCAG
TTTGGCTATG ATGCCGTCGG CCGACTGGTT AACGAGCAGC GCGTGGATGG CGTCGAGCTG
ACTTTCCACT ACGACGCCGC CGGTCACCTG TGCCAGCGGT CGCAGCGCGG TCATGCCGCG
AATGACGAAG CTATCTCACA CATTTATCAG CACGATGCGG CCGGGCAACT GGTGCGTCGT
GAACATGCCC ACGCCGTGTT CCACTACCAG CACAACAACA GAGGGCAACT GCTTTCCCTG
AAGCGTGAAC CAACCGGGGA AGGCCTCGCG CTGGGTCTCA CCGCCGATGA GGTCAGGCTG
ACCTATGACG CAGCGGGCGA CCTGTCAGGC GAACACGGCA GTGAAGGCGA CATCGGCTAT
ACCCGGGATG CACTGGGCAA CGTGAGTGCC CTGTCGCTAC CGGATGGTGA CACGCTGCGC
TGGTTGCGCT ACGGCTCCGG CCACGTCAGC GCGGTAAAAT TCAACCATCA GGTGGTCAGC
GAGTTTACCC GTGACCGGTT GCACCGGGAA ATCAGCCGTA CTCAGGGCCG CCGCACGCAG
CAACGGGCGT ATGACAGCCT CGGTCGCCTG ACCTCGCAGC GCAGCGGTCT CTGGGATGTC
GCGGAGCCGG AGCAGCAACT TCTCTCGCGG GCGTTACGCT ACACGGCTTC CGGCGAACTC
GCTTCAGTCA GGGACAGCCT GCGGGGTGAC GTGCAGTATG ATTACGATGC AGAAGGTCGC
CTGCTGAAAC GGATTGACGT GCACTGGCAG GTGCATCATC GGGCATATGG CTATGATGCG
GCTGACAATC TGCAGGATAG CGCTTATTCA CCGTCTGCCC GCCCACTCTC CGACAACCGC
CTGCTGAACT GGCGTCATCT GTGGAACCAG TATGACGGCC AGGGCAACCT GATACGGCGG
CGTGAAGGCA CAACGGAGCA GTTTTACCAG TATGATGCGG ACAACCGTCT GGTTGAAGCC
CGGGGCCGGG GGCCACAGGG CGAGTTTGTG GCCCGCTATG GCTATGATGC GCTGGGCAGA
CGCACCCGTA AAACGGTCAC CTGGGGTGAC AGCGGGAAAC AGGAAGAGAC GCGTTTCCTG
TGGGAAGGTT TTCGGCTGTT GCAGGCCAGA CAGGCTGACC GGACAGAAAC CTACCTTTAT
GACCCGACTA TCTGGTGGTC GCCGTTAGCA CGTATCACAC AGCAACCGGG CGCGCCTGAC
GGTGATATCC GCTGGTTCAA TACCGAGCTG AACGGCGCGC CGCTGGAGAT GACGGATGCG
GAAGGTGCGG TCCGCTGGAG TGGAGATTAC GGCAGCTTCG GTGCCATCAA TGGACAGACG
CAGGACAGTG AAGGACTGCG CCACGGCAAG CCGGTAGAAT CCCAGTCGCT ACGCTATGCC
GGACAATACG CGGATGAGGA AACGGGGTTA CACTACAACC TGTTCCGCTA TTACGACCCC
ACCGTAGGCC GCTTCACGAC ACAGGACCCG ATAGGCCTGG CGGGAGGGCT GAATCTTTAT
GCTTATGCGC CGAATCCGCT GGGGTGGGTG GATCCGCTGG GGTTGGCCAA AATATTAACC
GATGGTGTTG TCTATCGTAT GGGAAGTGGA ACCGACTCAA ATTTGACCCC TCGACCAGGA
AAAGATACAA CGACAGGACT ATCTACAACT ATCGAGAAAC CTTCTAATGG TAAATATCAA
ACTCTTGATG TGAAAACGCT AAATGATGGC GGATTAGATG TAGTTAAAGA TGGTAAAAAT
CATGCTTCTG TCAGGCCAAG TAATGATCCA GATATGTCTA GATTGAGAGA ATGGGCTGAT
ACCAGAGGAA CCGAGAAATC GTCTTCTTAT ACAAAGACTG TAAAGAAATC ATGTGGATAA
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| Protein sequence | MFEAARVGDG IGHSSALTGM ILGTIAGGLI AAAGGIAAGA LLVAGLGSCV VGGVLLIGLS
AAVGWATGEL AEKVRDGIAD SFASSMSKAG TIDEGSPTVF INGMKAAMAI LSIASCNKDG
PSMQVAEGSA TVYINNQPAS RLGDKVNCGA TITEGSSNVF IGGATKPMLP IRSEVPAWLY
KASDLTLLFA GLVGGVGGMA GKAGKLGKLL RELPGLNKLQ RLACRFGVLM TSIAAGGIIA
RPIDIVSGQK FLADEEELDF VLPSRLPVYW QRCWRSGNPG DSVLGKGWSL FWETTLTCYQ
DGLVWRAPSG DLISFPFVPV GQRSYCPAEK RWLEHHQDES WSVYGPDGEV WSYTALSPQG
KAVLARIAEP CGHDILFFWN DDDTLQALTD SAGRHLTCRY RDGRLDSVWL DESTCLVHYT
YNAQRQLITV TGRGGSVRRR FTWHDDGLMA SHEEASGLLS EYQWQEIADL PRVVAYRNSA
GEQLTLEYDF AGQRRTARRE DGLIAQWLLD DEGHVTHFTD YDGRETTLSY ADGELCDVIM
PGGASRKTTW DDYGRLLSET DPLGRETCYQ WYRLTGHITL VTYPDGSREQ MQYDDLNRLV
EEIDARGNST RYQYPTAQES LPDSITDALG GTVTLVWNRQ GLLTARTDCS GQCSTFEYDH
DGQLLASVDA EGHTTRREWD ACGHLTSVIY PDGRRETLRW NARGQLQAWR DAQNSEVRWH
YNVLGQPVSV TDRLRRTTRW HYDARGLLLR LENGNGAAYQ FGYDAVGRLV NEQRVDGVEL
TFHYDAAGHL CQRSQRGHAA NDEAISHIYQ HDAAGQLVRR EHAHAVFHYQ HNNRGQLLSL
KREPTGEGLA LGLTADEVRL TYDAAGDLSG EHGSEGDIGY TRDALGNVSA LSLPDGDTLR
WLRYGSGHVS AVKFNHQVVS EFTRDRLHRE ISRTQGRRTQ QRAYDSLGRL TSQRSGLWDV
AEPEQQLLSR ALRYTASGEL ASVRDSLRGD VQYDYDAEGR LLKRIDVHWQ VHHRAYGYDA
ADNLQDSAYS PSARPLSDNR LLNWRHLWNQ YDGQGNLIRR REGTTEQFYQ YDADNRLVEA
RGRGPQGEFV ARYGYDALGR RTRKTVTWGD SGKQEETRFL WEGFRLLQAR QADRTETYLY
DPTIWWSPLA RITQQPGAPD GDIRWFNTEL NGAPLEMTDA EGAVRWSGDY GSFGAINGQT
QDSEGLRHGK PVESQSLRYA GQYADEETGL HYNLFRYYDP TVGRFTTQDP IGLAGGLNLY
AYAPNPLGWV DPLGLAKILT DGVVYRMGSG TDSNLTPRPG KDTTTGLSTT IEKPSNGKYQ
TLDVKTLNDG GLDVVKDGKN HASVRPSNDP DMSRLREWAD TRGTEKSSSY TKTVKKSCG
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