| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0345 |
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| Symbol | |
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| ID | 8528708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 383546 |
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| End bp | 385405 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_003257805 |
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| Protein GI | 261819699 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCAACA GTACAGGATT ACAGTTCACC GTAAAGGTCG GCGCATTACC GGCCTCGACG
TTTGCGGTGG TCGATTTTCA GCTCAGCGAG GCGCTTAACC AGTCGTTTGC CCTGTCCCTC
AATCTGGCCA GCGCCCTGCC GGATGTGGAT TTTGGCGCGG TGCTGGACCA GCCCTGTGAG
CTGCTGATTT GGTTCGAAGG CGAGTTGAAG CGACGGGTGA GCGGGATAAT CAGCGGCTTT
GCCCAGGGTG ACACCGGCTT TCGCCGCACC CGCTATCAGG CGGAAGTGCG TCCGGCGTTG
TGGCGACTCG GCTTACGCAC CAACGCCCGC ATTTTTCAGG CGCAGAAGCC GGAGGCGATT
ATCGGCACCC TGCTGGAGGA AGCCGGGATT ACCGACTACG CCTTCTCGTT ACGTCATGAC
CATGCCCCGC GTGAATACTG CGTGCAGTAC CGGGAAAGTG ATTTGGCGTT TGTCACCCGA
CTGGCCGCAG AGGAAGGGCT GTACTTCTTC CACGAGTTTG AGGAAGGCAA ACACCGCGTC
GTCTTTGCCG ATGATGCCGG GGCGTTGGCC AAAGGCCCTG AACTGTTCTT CAACCTCGCC
ACGCAGGGGC TGAGTGAGGG TGAATACGTC CACCGTTTCC GCTACGCCGA GCGGGTCAGC
ATCGCCGAGG TGGCGCTCAA GGACTACAGC TTCAAAACCC CGGCCTATGG CCTGCTGCAC
AAGAAGATGA GCAGCGAACT GGCACACCAG CGCGAAAGCT ATCAGCACTT TGACTACCCC
GGACGCTTTA AAAAAGACCC GAGCGGCAAG GCGTTCAGCC GCTACCGGCT GGATGCACTG
CGTGCCGGGG CCATGACCGG CGCGGGGGAC TCCAACGCCG CGATGCTGAT GCCGGGCAAC
AGTTTCATGC TCACCGAGCA CCCCAACCTG CCCCTCAACA CTGGCTGGCA AGTGGTTGCC
ATCACCCACA GCGGGCAGCA ACCGCAGGCG CTGGAAGAAG AAAGCGGCGG CGAACCGACC
ACCTACAGCA ACAGCTTTGA GGTTATCAGC GCCAAAACCA CCTGGCGGGC GGACCTGCCG
TACAAGCCGA TGGTCGATGG CCCGCAGATT GCCACGGTGG TGGGCCCGGC CGGTGAAGAA
ATCTACTGTG ACGAATACGG CCGCATCAAG CTGCAGTTCC CGTGGGACCG CTACGGCGCA
AGTGATGACC AAAGCTCCTG CTGGGTGCGG GTGAGTCAGG GCTGGGCGGG CGGCCAGTAC
GGGCTGATAG CCATCCCGCG CATCGGTCAT GAAGTGATTG TCAGCTTCCT CGAAGGCGAC
CCGGACCAGC CGATAGTGAC CGGCAGAACC TTTCATGCCA CCAATCCGTC GCCGTACCCG
TTACCGGCCA ACAAGACACG TACCTCGCTG CGGACCGCCA CGCACAAGGG CGCCGGGTTC
AATGAACTGC GCTTTGAAGA CCAGGCCGGG CAGGAGGAAG TGTTTATCCA TGCCCAGAAG
GACATGAACA CCGTGGTGTT GAATAACCGC AGCACCGGTG TCGGGGGGAG TCATGAGGAA
AAAGTCAGGT ACGATCAGCT CAGCGTGGTG GGACGAGATC AGACGATTGA GGTTGTCCAC
AATCAGGAGA CCAAGATCCA GGGCACCCAG GGGGTCTTCG TCGGTGAGGG CCGTAAAACC
GATGTCACGT CCAACGACAC GCTGACTGTG ACGGGCCACA TTACCGTGAC ATCTACCGGT
GGCACCATCA CGCTGAAGGC GGGAGCGAGT TCGCTGACCC TTTGCAATAA TGGCGACATT
GAAATCAAGG GCGTGAACGT CAATGTGATC GGCAGCTCGC GTATCGATTT GAATAAATAA
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| Protein sequence | MANSTGLQFT VKVGALPAST FAVVDFQLSE ALNQSFALSL NLASALPDVD FGAVLDQPCE
LLIWFEGELK RRVSGIISGF AQGDTGFRRT RYQAEVRPAL WRLGLRTNAR IFQAQKPEAI
IGTLLEEAGI TDYAFSLRHD HAPREYCVQY RESDLAFVTR LAAEEGLYFF HEFEEGKHRV
VFADDAGALA KGPELFFNLA TQGLSEGEYV HRFRYAERVS IAEVALKDYS FKTPAYGLLH
KKMSSELAHQ RESYQHFDYP GRFKKDPSGK AFSRYRLDAL RAGAMTGAGD SNAAMLMPGN
SFMLTEHPNL PLNTGWQVVA ITHSGQQPQA LEEESGGEPT TYSNSFEVIS AKTTWRADLP
YKPMVDGPQI ATVVGPAGEE IYCDEYGRIK LQFPWDRYGA SDDQSSCWVR VSQGWAGGQY
GLIAIPRIGH EVIVSFLEGD PDQPIVTGRT FHATNPSPYP LPANKTRTSL RTATHKGAGF
NELRFEDQAG QEEVFIHAQK DMNTVVLNNR STGVGGSHEE KVRYDQLSVV GRDQTIEVVH
NQETKIQGTQ GVFVGEGRKT DVTSNDTLTV TGHITVTSTG GTITLKAGAS SLTLCNNGDI
EIKGVNVNVI GSSRIDLNK
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