Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0288 |
Symbol | |
ID | 8528650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 321300 |
End bp | 322112 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | putative ABC transporter ATP-binding protein YrbF |
Protein accession | YP_003257748 |
Protein GI | 261819642 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.154418 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACCATG AGGCAACTAA TCTGGTCGAG ATCCGTGGTC TTAGCTTTCG GCGCGGAGAG CGAGAGATTT TCACGGACAT CACACTTAAT GTCCCTAAAG GCAAAGTTAC TGCAATCATG GGGCCTTCCG GTATCGGTAA AACCACGTTG CTGCGTTTGA TCGGCGGGCA ACTATCGCCG GACAGCGGTG AAATCTGGTT TGATGGCGAG AATATCCCGG CGCTGTCGCG TAGCGAACTG TACAACGCGC GCAAGAAAAT GAGCATGTTG TTTCAGTCTG GGGCGTTATT CACCGATTTG AACGTGTTTG ATAATGTTGC CTGGCCGCTG CGTGAGCATA CCCAACTGCC GGAGTCCTTA CTGCGTAGCA TCGTCATGAT GAAGCTGGAA GCGGTAGGGT TGCGTGGGGC TGCCGAACTG ATGCCAGCGG AGCTTTCTGG CGGCATGGCG CGGCGTGCCG CACTGGCGCG AGCCATTGCG CTCGACCCGC AGATGATTAT GTTTGATGAG CCTTTTGTCG GGCAGGATCC AATCACATTG GGGACGCTGG TGAAGCTCAT CGATGAGTTA AACCATGCAT TGGGCGTGAC CTGCGTTGTC GTTTCTCACG ATGTACCGGA GGTGATGAGC ATCGCCGATT ACGCCTATAT CGTGGCCGAC AAACGGGTGA TAGCAGAAGG GACTGCGGAT CAACTGAGGG CGAACGATGA CCCGCAGGTC CGTCAGTTCC TGGATGGCAT CGCCGACGGG CCAGTGCCTT TCCGTTTTCC TGCCGGTGAC TATAAAACGT CGCTGCTAGG TTCAGGGGGT TAA
|
Protein sequence | MNHEATNLVE IRGLSFRRGE REIFTDITLN VPKGKVTAIM GPSGIGKTTL LRLIGGQLSP DSGEIWFDGE NIPALSRSEL YNARKKMSML FQSGALFTDL NVFDNVAWPL REHTQLPESL LRSIVMMKLE AVGLRGAAEL MPAELSGGMA RRAALARAIA LDPQMIMFDE PFVGQDPITL GTLVKLIDEL NHALGVTCVV VSHDVPEVMS IADYAYIVAD KRVIAEGTAD QLRANDDPQV RQFLDGIADG PVPFRFPAGD YKTSLLGSGG
|
| |