Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0244 |
Symbol | panF |
ID | 8528606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 276071 |
End bp | 277522 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | sodium/panthothenate symporter |
Protein accession | YP_003257705 |
Protein GI | 261819599 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAATTG AGATTTTATT GCCGCTGATT GGCTACCTGC TGCTGGTCTT CGGGCTGTCG GTCTATGCGT ACCGTCGCCG CCAGGCGGGT AACTTTCTTA ATGAGTATTT CCTCGGTGGC CGCTCGATGG GTGGGTTTGT CCTGGCGATG ACACTCATCG GCACCTACGT TAGCGCCAGT TCTTTTATCG GTGGGCCGGG TGCCGCTTAT AAATACGGGC TGGGCTGGGT GCTGCTTTCG ATGATCCAGC TTCCCACGAT GCTGCTATCG CTCGGCATTC TGGGGAAAAA ATTCGCCATT CTGGCTCGAC GTTACAATGC CATCACGCTG AATGACATGC TGTACGCCCG CTACAACAGC CCGCTGCTGG TATGGTTCGC CAGCATCAGC CTGCTGGTGG CGTTTATCGG TGCGATGGCC GTGCAGTTCA TCGGCGGCGC GCGCCTGCTG GAAACCGCCG CGAACATTCC TTATGACATC GGCCTGCTGA TTTTCGGCGT CACCATCGCG CTGTACACCA CGTTTGGCGG CTTCCGCGCC AGCGTGCTCA ATGATGCGAT GCAGGGCATT GTGATGTTAA TCGGTACGGT CATCCTGCTG GTCGGCGTGA TTTATGCTGC TGGCGGCTTA CACAGCGCGG TGGATAAGTT GCAGCAAATC GACCCAATGC TGGTATCGCC ACAGGGCAGC GGCGGCATTC TGTCGATGCC GTTTATGGCC TCATTCTGGG TGCTGGTCTG CTTCGGGGTC ATCGGCCTGC CGAACACCGC CGTCCGCTGC ATCTCTTATC GCGACAGCAA AGCACTGCAC CGTGGAATTA TCATCGGTAC AATTGTCATC GGTATTCTGA TGCTCGGCAT GCATCTGGCT GGGGCGCTGG GGCGTGCCGT TATGCCAAAT CTGACGATTC CCGATCAGGT TCTACCGGCG CTGATGGTCA CCGTGCTGCC GCCGCTGGCC GCGGGGATCT TTCTCGCCGC GCCAATGGCC GCTATCATGT CCAACATTAA TGCGCATTTA CTTCAGGCCT CTGCCACGAT CGTCAAGGAT CTCTATCTCA GCGTCCGTCC TGAGCAGATC CATAACGAAC GCCGCATCAA GATCCTGTCC AGTGTGACAA CTCTGCTGTT GGGGCTGCTG GTGCTGCTGG CCTCCTTACG GCCACCGGAT ATGATTATCT GGCTGAATCT GCTGGCGTTT GGCGGGCTGG AAGCGGTGTT CCTGTGGCCG CTGGTGCTGG GCCTGTATTG GGAACGCGCG AATGCTGCGG GTGCGCTTAG CGCCATGTTC TCCGGTGCCA TTTGCTATAC CTTACTGGCC AGCTTCAATC TTCAGTTGGC CGGATACCAC CCTATCGTGC CATCGCTGTT ACTCAGCCTG ATGGCGTTTA TTATTGGCAA TCGCTTTGGT CATAACCCAC CAGCGCCAGT TGCCGCTTCA TCTTCACTTT AA
|
Protein sequence | MQIEILLPLI GYLLLVFGLS VYAYRRRQAG NFLNEYFLGG RSMGGFVLAM TLIGTYVSAS SFIGGPGAAY KYGLGWVLLS MIQLPTMLLS LGILGKKFAI LARRYNAITL NDMLYARYNS PLLVWFASIS LLVAFIGAMA VQFIGGARLL ETAANIPYDI GLLIFGVTIA LYTTFGGFRA SVLNDAMQGI VMLIGTVILL VGVIYAAGGL HSAVDKLQQI DPMLVSPQGS GGILSMPFMA SFWVLVCFGV IGLPNTAVRC ISYRDSKALH RGIIIGTIVI GILMLGMHLA GALGRAVMPN LTIPDQVLPA LMVTVLPPLA AGIFLAAPMA AIMSNINAHL LQASATIVKD LYLSVRPEQI HNERRIKILS SVTTLLLGLL VLLASLRPPD MIIWLNLLAF GGLEAVFLWP LVLGLYWERA NAAGALSAMF SGAICYTLLA SFNLQLAGYH PIVPSLLLSL MAFIIGNRFG HNPPAPVAAS SSL
|
| |