Gene Pecwa_0220 details

Gene Information

• Locus tag: Pecwa_0220
• ID: 8528578
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 246701
• End bp: 248641
• Gene Length: 1941 bp
• Protein Length: 646 aa
• Translation table: 11
• GC content: 57%
• Product: thiamine biosynthesis protein ThiC
• Protein accession: YP_003257682
• Protein GI: 261819576

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.464551
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTACAG AACCAGTGCT GTCCAAATCA GGCCGCCGTG AACAACGTGC CGCTGCCCAG 
CAGTTTATTG AAACCTTACA GGGAACCGCC TTTCCCAATT CCCAACGCAT TTACCTTGCA 
GGCTCGCGCG ACGACATCGC CGTACCGATG CGTGAAATTC AGCTCAGCCC GACGCTACTC 
GGCGGCAGCA AAGACAATCC CCAATACGAA CCCAATGAGG CGATCCCAGT TTACGATACG 
TCAGGGCCGT ATGGCGATCC CGCGGCACAA CCCGATGTCC GCGTTGGGTT AGCGAAGCTA 
CGCGCCAACT GGATTGCAGA GCGTCACGAC ACCGAAGCGT TATCCGGCGT CAGCTCCGAT 
TTCACCCAGC AGCGTCTGGC AGATGCGGGT CTGGATCATC TGCGTTTCGA GCATTTGCCA 
CGGCCTTTAC GTGCCAAAGC GGGTAAACGC GTCACCCAGC TTCACTATGC ACGGCAGGGG 
ATAATTACCC CGGAAATGGA ATTTATCGCC ATTCGCGAAA ATATGGGACG CGAACGCATT 
CGCGGTGAAG TGCTGCGCCA ACAGCATCCT GGGCAAAGTT TCGGTGCCCT CCTGCCGGAA 
AACATCACGC CGGAGTTTGT CCGTCAGGAA GTGGCCGCCG GGCGCGCCAT TATTCCTTCA 
AACATCAACC ACCCCGAGTC GGAGCCGATG ATTATCGGGC GCAATTTTCT GGTGAAGGTG 
AACGCCAATA TCGGTAATTC TGCCGTGACA TCTTCCATCG AAGAAGAGGT GGAAAAGCTG 
GTCTGGTCTA CCCGCTGGGG TGCGGATACG GTGATGGACC TCTCAACTGG CCGCTATATT 
CACGAAACCC GCGAGTGGAT CCTGCGCAAC AGCCCGGTGC CCATTGGGAC GGTGCCGATC 
TATCAGGCAC TGGAAAAAGT GAATGGCATG GCAGAAAACC TGAACTGGGA AATGTTCCGC 
GATACGCTGC TGGAGCAGGC TGAGCAAGGG GTGGACTATT TCACTATCCA CGCGGGCGTA 
CTGCTGCGCT ACGTCCCGAT GACGGCCAAA CGCCTGACTG GCATCGTCTC ACGCGGGGGG 
TCCATCATGG CGAAGTGGTG CCTGTCGCAT CACAAAGAGA GCTTCCTGTA CGAACACTTC 
CGTGAAATTT GTGAAATCTG CGCCGCTTAT GACGTCGCGC TGTCGCTGGG TGACGGCTTA 
CGCCCAGGCT CCATTCAGGA TGCCAACGAC GAAGCGCAGT TCGCCGAGCT GCATACGCTG 
GGCGAGCTAA CCAAAATCGC TTGGGAATAC GACGTACAGG TGATGATCGA AGGCCCCGGC 
CACGTTCCGA TGCAGATGAT CCGCCGCAAC ATGACCGAAG AGTTGGAGCA CTGCCACGAA 
GCACCATTCT ATACGCTCGG CCCGCTGACC ACCGATATCG CACCGGGTTA CGATCACTTT 
ACCTCTGGTA TCGGTGCCGC CATGATCGGC TGGTTCGGCT GTGCAATGCT CTGCTACGTG 
ACGCCGAAAG AGCATCTCGG TTTGCCGAAC AAAGAAGATG TCAAACAGGG ACTGATTACC 
TACAAGATCG CCGCCCACGC CGCCGACTTG GCGAAAGGTC ATCCCGGGGC GCAAATCCGT 
GATAACGCTA TGTCGAAAGC CCGCTTCGAA TTCCGCTGGG AAGATCAGTT TAATCTGGCG 
CTCGATCCCC AAACGGCACG GGCCTACCAC GATGAAACGC TGCCGCAAGA ATCCGGTAAA 
GTCGCCCACT TCTGTTCTAT GTGCGGCCCG AAATTCTGCT CGATGAAAAT CTCGCAGGAA 
GTACGCGATT ACGCCGCCAA ACAGGAAGCC GAAGCCAAAC CGATTGAAGT CGGAATGGCA 
CAGATGTCAC AGGAATTCCG CTCTCGCGGC AGCGAGCTTT ATCACAGCGC CACCAGCCTG 
CCAGCCGAGG AAAACCAATG A 

 

Protein sequence

MSTEPVLSKS GRREQRAAAQ QFIETLQGTA FPNSQRIYLA GSRDDIAVPM REIQLSPTLL 
GGSKDNPQYE PNEAIPVYDT SGPYGDPAAQ PDVRVGLAKL RANWIAERHD TEALSGVSSD 
FTQQRLADAG LDHLRFEHLP RPLRAKAGKR VTQLHYARQG IITPEMEFIA IRENMGRERI 
RGEVLRQQHP GQSFGALLPE NITPEFVRQE VAAGRAIIPS NINHPESEPM IIGRNFLVKV 
NANIGNSAVT SSIEEEVEKL VWSTRWGADT VMDLSTGRYI HETREWILRN SPVPIGTVPI 
YQALEKVNGM AENLNWEMFR DTLLEQAEQG VDYFTIHAGV LLRYVPMTAK RLTGIVSRGG 
SIMAKWCLSH HKESFLYEHF REICEICAAY DVALSLGDGL RPGSIQDAND EAQFAELHTL 
GELTKIAWEY DVQVMIEGPG HVPMQMIRRN MTEELEHCHE APFYTLGPLT TDIAPGYDHF 
TSGIGAAMIG WFGCAMLCYV TPKEHLGLPN KEDVKQGLIT YKIAAHAADL AKGHPGAQIR 
DNAMSKARFE FRWEDQFNLA LDPQTARAYH DETLPQESGK VAHFCSMCGP KFCSMKISQE 
VRDYAAKQEA EAKPIEVGMA QMSQEFRSRG SELYHSATSL PAEENQ