| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0100 |
|---|
| Symbol | livM |
|---|
| ID | 8528450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 115358 |
|---|
| End bp | 116632 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | leucine/isoleucine/valine transporter permease subunit |
|---|
| Protein accession | YP_003257575 |
|---|
| Protein GI | 261819469 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGC TCAACCTGTT TAATGCGTTA GTTTCCGCGT TCATGCTGCT GGTGCTGGCC
TCGTTTTTAA TGGGCATGCA ACTGGCGCTG GATGGCACCA AACTGGTAGT GCGCGGTGCC
GATGAAGTTC GCTGGTATTG GATTGGTGCG GGCTGCATCG TGGTGTTCTT CTTTCAATTG
ATCCGCCCGT TCTTCCAGCA AAGCATCAAG AAATTTTCCG CACCGTCTCT GGTGCTGCCC
AGCTTTGATG GCAGTACGCC ACGGCAGAAG GTATTGGCTG CCGCGTTGAT TATCGCCGCT
ATTGCCTGGC CGTTTCTGGT CTCGCGCGGT ACGGTGGATA TTGCCACCCT CACATTGATT
TACGTGATGC TGGGTCTGGG CTTGAACGTC GTCGTGGGGC TGTCCGGTCT GCTGGTGTTG
GGCTACGGCG GGTTTTACGC CATTGGCGCG TATACTTATG CCTTGCTGAA CCACTATTAC
GGATTGGGTT TCTGGGAAAG TTTGCCGCTG GCGGGCATGG CGGCGGCGCT GTCCGGCTTC
CTGCTGGGGT TCCCGGTGCT GCGTTTACGC GGCGACTATC TGGCGATTGT GACGCTCGGG
TTCGGCGAAA TTGTCCGTAT CCTGTTGCTG AACAATACCG AAATTACCGG TGGCCCGAAC
GGCATCAGCC AGATCCCTAA ACCGACCTTC TTGGGTCTGG AATTTGGCCG CAGCGCGCGC
GATGGCGGTT GGGATACGTT CCATAATTTC TTCGGTCTGC AATATGACCC CAGCGATCGC
GTCATCTTCC TGTATCTGGT CGCGCTGCTG TTGGTCATAT TAACCCTGTT TGTGATTAAT
CGTCTGCTGC GGATGCCGCT GGGCCGCGCC TGGGAAGCGC TACGCGATGA TGAGATCGCC
TGTCGTTCTC TGGGGCTGAG CCCAACGCGC ATCAAGCTGA CCGCCTTTAC CATCAGCGCC
GCATTCGCTG GGTTCGCGGG TACGCTGTTT GCCGCGCGTC AAGGCTTTGT CAGCCCGGAA
TCGTTCACGT TTGCTGAGTC GGCCTTTGTG CTGGCCATCG TTGTGCTGGG TGGCATGGGC
TCGCAGTTTG CGGTCATTCT CGCTGCGATC CTGCTGGTCG TGTCTCGCGA GCTGATGCGT
GACCTGAATG AATACAGCAT GCTGTTGCTG GGTGCATTGA TGGTTCTGAT GATGATTTGG
CGTCCGCAAG GCTTGCTGCC GATGACGCGT CCTGAGATGA AGTTGAAAGT CGCGAAGAAG
GAAGAGCAAG CATGA
|
|---|
| Protein sequence | MKQLNLFNAL VSAFMLLVLA SFLMGMQLAL DGTKLVVRGA DEVRWYWIGA GCIVVFFFQL
IRPFFQQSIK KFSAPSLVLP SFDGSTPRQK VLAAALIIAA IAWPFLVSRG TVDIATLTLI
YVMLGLGLNV VVGLSGLLVL GYGGFYAIGA YTYALLNHYY GLGFWESLPL AGMAAALSGF
LLGFPVLRLR GDYLAIVTLG FGEIVRILLL NNTEITGGPN GISQIPKPTF LGLEFGRSAR
DGGWDTFHNF FGLQYDPSDR VIFLYLVALL LVILTLFVIN RLLRMPLGRA WEALRDDEIA
CRSLGLSPTR IKLTAFTISA AFAGFAGTLF AARQGFVSPE SFTFAESAFV LAIVVLGGMG
SQFAVILAAI LLVVSRELMR DLNEYSMLLL GALMVLMMIW RPQGLLPMTR PEMKLKVAKK
EEQA
|
|---|
| |