| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0081 |
|---|
| Symbol | |
|---|
| ID | 8528431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 96108 |
|---|
| End bp | 97610 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | peptidase M16 domain protein |
|---|
| Protein accession | YP_003257556 |
|---|
| Protein GI | 261819450 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGGCA CCAAAAAGGC GCTTTTCGTT GGTGGTATGT TGCTGGCCGT GGTCAGCAGC
AGCGTGCAGG CTGAAGCACT ACAGCCCGAT CCTGCCTGGC AGCAGGGTAA ACTGGATAAT
GGTTTTACCT GGCAGTTATT AACCACGCCA CAGCGCCCCG GCGATCGGGT TGAGTTGCGT
CTGGTTGTTA ATGCCGGATC GTTGCTGGAA AACGCCCAGC AGGTGGGCTT TGCGCATTTT
CTTCCCCGCC TGGCTCTTGC GCCCGGCGAT AAGCTATCCG CTGCCCAGTT ACCTTCCATG
TGGCTGCGCG ACGCTAATAG CTCACGCGTC CTTCCCCCGG TCGTTGTCTC GTATGATTTC
ACGTCGTATA ACCTGAGCCT GCCGAATAAT CGTCCCGAAC TGCTGAAAGA AGCGCTGACG
TGGCTGGCGG AAAGCGCAGG GCATATGACG TTCGACGAAA AAAGGCTACA GACCGCGCTG
AAGGTGCCCG ATCAGGTTGC CACCTTCCCG GTTAACCCGC AGGATCCGAG CTGGCGCTAT
CGCCTGAAAG GGTCGCCTCT GCTGGCGCAC GATCCTGCTC AGGACGTTAA ACCGCCGCTG
AATGGCGAGC AGATCCAGCA ATTTTATAAA ACCTGGTATA CACCAGATGC GATGACGCTC
TACATCGTTG GCCATGTTGA TAACCGCAGC GTGCTCGAGC AGATCGGTAA AGCTTTCTCT
CCGTTGGAAG GGAAACGCGA AGCGCCAGCG CCGTTGCCGA CATTAAGCCC GCTGCCGCCG
CAGGCGATCA GCCTGATGAA TAACAACGCC CAGCAGGATA CGCTGTCGCT GATGTGGGAT
GCGCCGTGGC ATCCGATTCG TGAGTCTCAG GCGCTGGTGC GCTACTGGCT GGGTGACATG
ACGCGAGAAG CGATGTTCTG GCACCTGCAG CAGGTGCTGG AGAAGAGTCC GCAGAAGGGT
AACAACCTCC GTTTCGACTG CAACGTGTTT TATACCCGTT CTCAGTGCGC GATTCATATG
GATGTACCGA ATAGCGAGAG CGTTGAACCG GGCGTGACGT TTATGGCACG CGAGCTGGCT
ACACTGCGTG AAAAGGGGCT GACACAACAA GAGTTTGACG CGTTGATCGC GCGTAAGACG
GACGAGCTGA ACAAGTTGTT TGCCACTTAT GCGCGTACCA GCACGGACAT CCTGATGGAT
CAGCGCCTGC GATCTCAGCA AAATGGCGTG GTGGATATTG CTCCCGAGCA GTATCAGAAA
CTGCGCCAGA CTTATCTGTC GGCCTTGACG CTGGATATCC TGAATCAGGA ACTGCACCAG
CAACTGGTAC AAGATACGAC GCTGATGTTG ATCCAACAGC CGGGTGAGCC TGAAGCGAAT
ATGAAGGCGT TGCAGGAAGC CTACGACCAG ATTATGACGC CAGCCGTTGA GCCGGTTGCC
AGTGCGTCTG CATCGGCTTC GGAAGAAGCC AAACTGCAGG ACAAGGTTCC TGCCGCGCAG
TAA
|
|---|
| Protein sequence | MQGTKKALFV GGMLLAVVSS SVQAEALQPD PAWQQGKLDN GFTWQLLTTP QRPGDRVELR
LVVNAGSLLE NAQQVGFAHF LPRLALAPGD KLSAAQLPSM WLRDANSSRV LPPVVVSYDF
TSYNLSLPNN RPELLKEALT WLAESAGHMT FDEKRLQTAL KVPDQVATFP VNPQDPSWRY
RLKGSPLLAH DPAQDVKPPL NGEQIQQFYK TWYTPDAMTL YIVGHVDNRS VLEQIGKAFS
PLEGKREAPA PLPTLSPLPP QAISLMNNNA QQDTLSLMWD APWHPIRESQ ALVRYWLGDM
TREAMFWHLQ QVLEKSPQKG NNLRFDCNVF YTRSQCAIHM DVPNSESVEP GVTFMARELA
TLREKGLTQQ EFDALIARKT DELNKLFATY ARTSTDILMD QRLRSQQNGV VDIAPEQYQK
LRQTYLSALT LDILNQELHQ QLVQDTTLML IQQPGEPEAN MKALQEAYDQ IMTPAVEPVA
SASASASEEA KLQDKVPAAQ
|
|---|
| |