| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0062 |
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| Symbol | avtA |
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| ID | 8528412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 66115 |
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| End bp | 67368 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | valine--pyruvate transaminase |
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| Protein accession | YP_003257537 |
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| Protein GI | 261819431 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTTT CTCTTTTCGG CAAGAAATTC ACGCGCCACG CTGGCATCAC CCAATTAATG
GACGACCTGA ACGAAGGGCT GCGCACGCCA GGCGCAATCA TGCTGGGGGG CGGCAATCCG
GCGCACATTC CAGAGATGGA TAGCTACTTC AAACAGCTAT GTCAGGATAT GCTGGAACAA
GGGAAACTGA CGGAAGCGCT ATGCAACTAC GACGGCCCGC AAGGTAAGGA TACGCTGCTT
AATGCGTTGG CCAAACTCCT GAGTAATGAA TTAGGCTGGC AGATTGGACC ACAGAATATT
GCGCTGACAA ATGGCAGCCA GAGTGCATTT TTCTACTTAT TTAACCTGTT TGCAGGCCGC
CAGAGCGATG GCAGCCTGAA AAAGGTGCTG TTTCCGCTGA CGCCGGAATA TATCGGTTAT
TCAGATTCCG GGCTGGACGA AGACATGTTC GTTTCCGTTC GGCCGCAGAT CGAACTGTTA
CCTGAAGGAC AATTTAAATA TCACGTCGAT TTCGATCATC TGTCGATTAC CGATGATATT
GGGCTAGTTT GCGTATCCCG ACCAACCAAC CCAACCGGTA ACGTGTTGAC CGACGACGAG
CTGATGCGTC TGGATATTCT GGCGCAGCAG CACAAGGTTC CTCTGCTGAT TGATAACGCC
TATGGCGTGC CTTTCCCCGG TATCATTTTC AGTGATGCCA CGCCGCTGTG GAACCCGAAC
ATCATCCTGT GCATGAGCCT GTCCAAACTG GGTCTGCCCG GTTCGCGCTG CGGTATCGTG
ATTGCAGATG AAAAAGTGAT TTCAGCGATC GGCAACATGA ACGGCATCAT TAGTCTGTCA
CCAGGCGCGG TCGGCCCGGC GCTGGCGCAT GAGATGATTC AGCGTGGCGA TCTGCTACGC
CTATCTAATG ACGTCATACG CCCGTTCTAC CAGCAGCGCG TGACGGAAAC CATCGCGATT
ATTCGCCGCT ATCTGTCGCC CGAACAGTGC CTGATTCACA AACCGGAAGG TGCGATCTTC
CTATGGCTGT GGTTCAAAGA GTTGCCTATC ACGACGGAAG TGCTGTACCA GCGCCTGAAA
AAACGCGGAG TTCTCATGGT GCCGGGTCAC TATTTCTTCC CCGGTCTGGA GCAAGAATGG
CCACACGCTC ATCAGTGCAT GCGTATGAAC TATGTGCCAG AGCCGGAAAA AATCGAACGT
GGTATTGCGA TACTGGCGGA AGAAGTCGAA AAGGCAATTT CTGTCGGTAG CTAA
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| Protein sequence | MNFSLFGKKF TRHAGITQLM DDLNEGLRTP GAIMLGGGNP AHIPEMDSYF KQLCQDMLEQ
GKLTEALCNY DGPQGKDTLL NALAKLLSNE LGWQIGPQNI ALTNGSQSAF FYLFNLFAGR
QSDGSLKKVL FPLTPEYIGY SDSGLDEDMF VSVRPQIELL PEGQFKYHVD FDHLSITDDI
GLVCVSRPTN PTGNVLTDDE LMRLDILAQQ HKVPLLIDNA YGVPFPGIIF SDATPLWNPN
IILCMSLSKL GLPGSRCGIV IADEKVISAI GNMNGIISLS PGAVGPALAH EMIQRGDLLR
LSNDVIRPFY QQRVTETIAI IRRYLSPEQC LIHKPEGAIF LWLWFKELPI TTEVLYQRLK
KRGVLMVPGH YFFPGLEQEW PHAHQCMRMN YVPEPEKIER GIAILAEEVE KAISVGS
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