| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0061 |
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| Symbol | |
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| ID | 8528411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 65245 |
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| End bp | 65763 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | type VI secretion system effector, Hcp1 family |
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| Protein accession | YP_003257536 |
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| Protein GI | 261819430 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAACTC CATGCTATAT CAGCATCGAA GGTAAAACAC AGGGCAACAT TACTGCTGGT
GCTTTCACCT CTGACTCTGT CGGCAACATC TACGTGGAAG GCCACGAAGA CGAGATGCTG
GTTCAGGAAT TTAAGCACAT CGTCACCGTA CCAACCGACC CGCAGTCCGG TCAGCCATCC
GGTCAGCGCG TCCACAAACC GTTCAAATTC ACCGTCGCAC TGAACAAAGC GGTGCCACTG
CTGTACAACG CGCTGTCTAC TGGTGAAATG CTGCCGACCA CGACCCTGAA GTGGTATCGC
ACCTCAGTGG AAGGCAAGCA GGAACACTTC TTCTCTACCA TCCTGACCGA TGCCACCATC
GTTGATATCG ACTGCAAAAT GCCACACTGT CAGGACCCGG CCAAGCTAGA CTACACCCAA
CTGATTGAAG TCTCGCTGGC TTACCGTAAA ATCGACTGGG AGCACACTGT CGCTGGGACC
TCTGGCTCTG ACGACTGGCG TGCGCCGGTC GAAGCCTAA
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| Protein sequence | MPTPCYISIE GKTQGNITAG AFTSDSVGNI YVEGHEDEML VQEFKHIVTV PTDPQSGQPS
GQRVHKPFKF TVALNKAVPL LYNALSTGEM LPTTTLKWYR TSVEGKQEHF FSTILTDATI
VDIDCKMPHC QDPAKLDYTQ LIEVSLAYRK IDWEHTVAGT SGSDDWRAPV EA
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