Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0044 |
Symbol | |
ID | 8528394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 48388 |
End bp | 50016 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | sensory histidine kinase DcuS |
Protein accession | YP_003257520 |
Protein GI | 261819414 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCAAGA AAAAGGCACC GCTAAAGCTG GGTACATCGG TGTTTTTGAT GGTGTCAGTG GTACTTGGCG CGGTGTTGTT GGTGGTCTAT TCCCTGCTGT TTTTTCGTAT TAATCAGCTT TCGGAAGATC ATCTGCGAGA AAAAGCCTTT GCCATTGCTC GCACATTTGC GTCCTCTCCC GTTGTTATTG ATGAACTCAA AGGGATTGGC CGACCGGAGG AAGTGCAGAT TGCTGCGGAG ACTATCCGCC AACGTAATCA ACTGCTCTTC GTCACCGTCA CGGATATGGA TACGGTGCGC CATAGCCACC CTGAACCGGA AAGAATTGGC GAATATTTCG CGGGTCGGGA TATCTATCCC GCGCTGTTGG GCATGGAGAA TACCGCGATA AACCGGGGTA CGCTCGATCC GGCGCTGCGG GTATTTACGC CGGTTTTTGA CAATAACCAT AAGCAGGTTG GCGTTGTTGC GCTGGGGATT GCCCTAACCA GCGTGCAGAA GGTGATCAGC GATAACCGCT GGATGATCCC CTGGACGTTA TTGGCGGGGG CGCTGGTTGG CTGGTTGGGT ACGCTGATTT TGGTGAAGAT ACTCAAGCGT ATTATGCTGG GATTCGAACC GTTTGAGATA TCGAACCTGT TTGAACAGCG CAACGCGATG CTAAAACACA TCAAAGAAGG GGTTATTGCG GTCGATCAAC ATGGTCGGAT TACGGTAATC AATGATGAGG CGCGACGGCT TTTTCGGCAG AATCATCCAC AGGGCAGTGA AAAGCCGGTG CTGAAGCCAA CTGAGCGAGT CAGCGAACAG TGGCTTGAGC ATCTGCATTT GAAACAGGTG CTGGAGAGCG GTACGCCGCG GCGCGATGAA GAGATTAACT TTAACGGGCA TCTGCTGCTG ACCAACACGG TTCCGGTTTT TGTGAAGGGC GATATTATCG GCGCGATTGC GACGTTCCGT GATAAAACGG AGATCAGCCA GTTACTGCAA CGGTTGAGTG GGATGTCCTA CTATGCGGAT GCGCTGCGTG CGCAGTCGCA TGAGTTTATG AATAAGCTGC ACGTCATCTT AGGGATGTTG CACTTAAAAT ATTACTCGCA GTTGGAAGAC TATATCCTGA AGACCGCCAA TAATTATCAG GCGGAGATTG GTTCGATTAT TCGTAAAGTG AAATCGCCAG TGATTGCCGG CTTCCTGTTG GGTAAAATCA ACCGAGCGCG CGATCTCGGC ATTACGCTCT CCATCAGTGA GGAGAGTCTG CTGCCGGATA CCGATGATGT CGATGCCACG AATGAATTGA TTACCGTATT GGGTAATCTG ATTGAGAATG CGATGGACGC AATTGATGAG CAGGAAAACT GTGAAATCAG CGTGAGCTTC CATCATCAGA ATAGCCGCCT TCACTGTACC GTGGGGGATG ACGGCCCTGG CATTTCGTTG GAAAGTCAGG CGCGCATTTA TGAACAGGGA TTCTCTACCA AAGGCAGCGG GCGCGGTATT GGCCTGTACC TGACCAAACA GAGTCTGGAG AAGATTGGCG GCACTATCGA GTTTGAATCA GAACCTGATG TGTACACCCA GTTTTTCGTT ACTATTCCTT ATCAAGCAAG GCTGTTTGAC CATGATTAA
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Protein sequence | MGKKKAPLKL GTSVFLMVSV VLGAVLLVVY SLLFFRINQL SEDHLREKAF AIARTFASSP VVIDELKGIG RPEEVQIAAE TIRQRNQLLF VTVTDMDTVR HSHPEPERIG EYFAGRDIYP ALLGMENTAI NRGTLDPALR VFTPVFDNNH KQVGVVALGI ALTSVQKVIS DNRWMIPWTL LAGALVGWLG TLILVKILKR IMLGFEPFEI SNLFEQRNAM LKHIKEGVIA VDQHGRITVI NDEARRLFRQ NHPQGSEKPV LKPTERVSEQ WLEHLHLKQV LESGTPRRDE EINFNGHLLL TNTVPVFVKG DIIGAIATFR DKTEISQLLQ RLSGMSYYAD ALRAQSHEFM NKLHVILGML HLKYYSQLED YILKTANNYQ AEIGSIIRKV KSPVIAGFLL GKINRARDLG ITLSISEESL LPDTDDVDAT NELITVLGNL IENAMDAIDE QENCEISVSF HHQNSRLHCT VGDDGPGISL ESQARIYEQG FSTKGSGRGI GLYLTKQSLE KIGGTIEFES EPDVYTQFFV TIPYQARLFD HD
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