Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0011 |
Symbol | |
ID | 8528361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 13175 |
End bp | 14617 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | glycoside hydrolase family 1 |
Protein accession | YP_003257487 |
Protein GI | 261819381 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTATTG AACAATTACC GAAAGACTTT CTGTGGGGCG GCGCAGTAGC GGCGCATCAA GTTGAAGGTG GTTGGGATCA AGGTGGCAAA GGCACCAGCA TTTGCGATGT CCTGTCCGGT GGTGCGCACG GCGTTGACCG TGTGATTACC GATGGTGTAC AGCCTGGTGT CAGTTATCCA AACCATCAGG CGGTGGAGTT CTATTCCCAC TATAAGCAGG ATATCGCCCT GTTCGCCGAA ATGGGCTTCA AATGCTTCCG TACCTCGATT GCCTGGACGC GTATTTTCCC CAATGGCGAT GAGCTAGAAC CGAATGAAGC GGGTCTGCAA TTCTATGACG ACCTGTTTGA TGAGTTGCTG AAATACAACA TTGAGCCAGT GATTACGCTG TCTCACTTTG AGATGCCACA TCACTTGGTT AAGCAGTACG GCGGCTGGTT GAACCGCAAG GTAGTGGATT TCTTTGTGCG CTACAGCGAA GTGGTTATGA AGCGTTACCA GTCTAAAGTG AAATACTGGA TGACCTTCAA TGAGATCAAC AACCAGCGCA ACTGGCAGTA TCCGCTGTTC GGCTACTGCT GTTCCGGCGT GATTTTTACC GATCACGACA AGCCGGAGCA GGCGATGTAC CAAACGTTGC ACCACCAGTT TGTCGCCAGT GCGAAAGTGG TGAAGCTGGG TCATGAGATT AACCCGGATT TCAAAATTGG CTGCATGCTG GCGTTGGTGC CGCTCTATCC GTGGTCATGT CACCCGGATG ACGTGATGTT TGCACAGGAA GGGATGCGTC AGCACCATCT GTTCGGTGAC GTACAACTGC GCGGTTATTA TCCGTCTTAC ATCCTGAAAG AGTGGGCGAG AAAGGGCTAT CACATTGATA TGCAGCCGGA AGATGAACAG ACATTACGTG AAGGTTGCAC GGATTATCTG GGCTTCAGCT ACTACATGAG CAATGCGGTG CAGTACGCGG CAAAAGGCCG GAAAACCGAA GATGTCATCG TTGGGTTTGA CGGTGGCGTG AAAAATCCGC ATGTGAAGGC GTCGGAGTGG GGCTGGCAGA TTGACCCGGT CGGCCTGCGC TATACGCTGA ACAGCTTCTA CGAGCGTTAT CAGAAGCCGA TGTTCATCGT CGAAAATGGC TTTGGTGCGG TGGATAAGGT GGAAGCCGAT GGCAGCATTA ATGACGACTA CCGCATCGAT TATCTCAAAG CACACATTGA GCAAATGAAG AAAGCCGTTG TGGAAGATGG TGTGGAACTG ATGGGCTATA CGCCGTGGGG TTGTATCGAC TGCGTGTCGT TTACCACCGG CCAGTACAGC AAACGCTACG GTTTCATCTA CGTGGATAAG CATGATGATG GCACCGGCAC ATTCAATCGC TCGAAGAAGA AGAGCTTTGA CTGGTATAAG AAGGTGATTT CCAGCAACGG CGCTGAGCTA TAA
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Protein sequence | MSIEQLPKDF LWGGAVAAHQ VEGGWDQGGK GTSICDVLSG GAHGVDRVIT DGVQPGVSYP NHQAVEFYSH YKQDIALFAE MGFKCFRTSI AWTRIFPNGD ELEPNEAGLQ FYDDLFDELL KYNIEPVITL SHFEMPHHLV KQYGGWLNRK VVDFFVRYSE VVMKRYQSKV KYWMTFNEIN NQRNWQYPLF GYCCSGVIFT DHDKPEQAMY QTLHHQFVAS AKVVKLGHEI NPDFKIGCML ALVPLYPWSC HPDDVMFAQE GMRQHHLFGD VQLRGYYPSY ILKEWARKGY HIDMQPEDEQ TLREGCTDYL GFSYYMSNAV QYAAKGRKTE DVIVGFDGGV KNPHVKASEW GWQIDPVGLR YTLNSFYERY QKPMFIVENG FGAVDKVEAD GSINDDYRID YLKAHIEQMK KAVVEDGVEL MGYTPWGCID CVSFTTGQYS KRYGFIYVDK HDDGTGTFNR SKKKSFDWYK KVISSNGAEL
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