Gene GYMC61_0260 details

Gene Information

• Locus tag: GYMC61_0260
• ID: 8524066
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacillus sp. Y412MC61
• Kingdom: Bacteria
• Replicon accession: NC_013411
• Strand: +
• Start bp: 262504
• End bp: 264567
• Gene Length: 2064 bp
• Protein Length: 687 aa
• Translation table: 11
• GC content: 54%
• Product: PAS modulated sigma54 specific transcriptional regulator, Fis family
• Protein accession: YP_003251440
• Protein GI: 261417758

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAG TGATGCTTAT TGGCGCTGAC TCGCGTGGGA CATCGTTGTT GAAGCTGCTC 
CATGGGGCAT CAGGGTTTGA AGTCGTGGCA GTCGTGGATG TAGATGAACA CGCTCCGGGG 
TTGCAGCTGG CGCGCCGATG GGGTATTGCC GCCGCCAGCG ACTGGCGTCC ATGGATGGCC 
AAACCGCTTG ATTTGATCAT TGAAACGACG GGCAGGGCGG ATGTTTTGGA AGAAATCCGC 
CGACGGGCAC CCGAGGGGGC GAATATTGTT CCGAGCGCGG TCGCGCGGAT GATGGCCGAG 
CTCGTTGCAG AAAAAGAAGC GCTCATCGCT GAGCTGAAAA GTGAAGCAGC TCGGCGCGCG 
CTCATCTTTC ATTCGTCCCA TGATGGCATG ATTGTTGTAG ATGAATATGC TTACATTACC 
GATATGAATC AAAGCGCGGC GGAGCTCCTT GGAGTGGACA AAGACGAAGT GATTGGCAAA 
CATATTTTGG ATGTTTTGCC GTCAAGCGGC TTGCCACGCG TGCTGAAAAC GAGGCAGACC 
GAATTTCATC AGGAAGTGGA ACTGGCCAAT GGAAAAAAAT TGATCACCAC CCGCATCCCG 
ATCATCGATG ACAATGGCAA ACTGTTTGGG GCGCTCGCTG TGTTTAAAGA CATTACCGAG 
CTTGTCGCTT TGGCGGAAGA AATCACCGAC TTAAAAGAAG TCCGCATGAT GCTCGAAGCG 
ATCATCTATT CGTCGGAAGA GGCGATTTCC GTCGTCGATG AAAATGGGAA CGGCATTTTG 
ATCAACCCGG CGTATACACG GCTCACCGGT TTGACAGAGG AAGACGTCAT CGGCAAACCG 
GCGACGGCCG ACATCGCCGA AGGGGAAAGC ATGCATATGC AAGTATTGAA AACGCGCCGC 
CCGGTGCGCG GGGCGCGCAT GAAAGTCGGC CCGAAAAACC GGGATGTCAT CGTCAATGTC 
GCGCCGATCA TCGTCGATGG CGTATTGAAA GGGAGCGTCG GCGTCATTCA TGATGTGTCA 
GAAATTCAGC GGCTGACGGC TGAGCTCAAT CGGGCGCGGC AAATCATCCG CACGCTCGAG 
GCGAAATATT CGTTTGCGGA TATTGTCGGT GAGTCAGAGG AGATGAAGGT GGCGATCGAG 
CAGGCGAAGC TGGCGGCGAA AACACCGGCG ACGATTTTGC TGCGGGGGGA ATCAGGGACG 
GGCAAGGAGC TGTTCGCCCA CGCCATTCAC AACGCGAGCG ACCGAAAGTA TAACAAGTTT 
ATCCGCGTGA ATTGCGCGGC CATTCCGGAA ACATTATTAG AAAGCGAACT GTTTGGCTAT 
GAGGAAGGAG CGTTTTCCGG TGCGCGGCGC GGCGGCAAGA GAGGGTTGTT TGAAGAAGCA 
AACAACGGCA GCATTTTTCT TGACGAAATC GGCGAGCTGT CGGCCAGCAC GCAGGCGAAG 
CTGCTCCGCG TTTTGCAGGA GCGGGAAATC GTTCGCGTCG GCGGGACGAA GCCAATCCCG 
ATCAACGTCC GCGTCATCGC CGCCACGAAC GTCAACCTTG AAAAAGCAAT TGCCGAAGGT 
GCATTTCGCG AAGACTTATA CTATCGGCTC AATCGGATGC CGATTTATAT TCCGCCGCTG 
CGCGCTCGCA AGGAAGACAT TCCAGCGCTT TGCCGGCATT TGATCCAGAA ACTGAACCAA 
GATTACGGGC GCAACGTCGA AGGTGTCACG GATGAAGCGA TGGCGAAGCT TCTTGCCTAT 
GATTGGCCGG GAAATGTCCG CGAGCTCGAA AACGTGCTCG GGCGGGCGAT GATTTTTATG 
AAATTTCATG AGGTGATGAT CGATGCGACG CATTTGCCGC CGCTCGCTTC GCCTTCGTCA 
GTGCCGGCTC ATCGAGTGGA AACGGAAGAG GAGATTCGGC CGCTTGAGGA AATGGTGAGC 
CGATACGAAG CGAGCTTGAT TGAGCAGGCG CTTCGCCGCC ATCGCGGCAA TAAAACAGCG 
GCGGCTCGGG CGCTTGGCAT TTCGGTGCGC AATTTATACT ACAAACTGGA AAAATACAAC 
CTTGACAAAA AAATCATGCA ATAA 

 

Protein sequence

MKKVMLIGAD SRGTSLLKLL HGASGFEVVA VVDVDEHAPG LQLARRWGIA AASDWRPWMA 
KPLDLIIETT GRADVLEEIR RRAPEGANIV PSAVARMMAE LVAEKEALIA ELKSEAARRA 
LIFHSSHDGM IVVDEYAYIT DMNQSAAELL GVDKDEVIGK HILDVLPSSG LPRVLKTRQT 
EFHQEVELAN GKKLITTRIP IIDDNGKLFG ALAVFKDITE LVALAEEITD LKEVRMMLEA 
IIYSSEEAIS VVDENGNGIL INPAYTRLTG LTEEDVIGKP ATADIAEGES MHMQVLKTRR 
PVRGARMKVG PKNRDVIVNV APIIVDGVLK GSVGVIHDVS EIQRLTAELN RARQIIRTLE 
AKYSFADIVG ESEEMKVAIE QAKLAAKTPA TILLRGESGT GKELFAHAIH NASDRKYNKF 
IRVNCAAIPE TLLESELFGY EEGAFSGARR GGKRGLFEEA NNGSIFLDEI GELSASTQAK 
LLRVLQEREI VRVGGTKPIP INVRVIAATN VNLEKAIAEG AFREDLYYRL NRMPIYIPPL 
RARKEDIPAL CRHLIQKLNQ DYGRNVEGVT DEAMAKLLAY DWPGNVRELE NVLGRAMIFM 
KFHEVMIDAT HLPPLASPSS VPAHRVETEE EIRPLEEMVS RYEASLIEQA LRRHRGNKTA 
AARALGISVR NLYYKLEKYN LDKKIMQ