Gene GYMC61_0099 details

Gene Information

• Locus tag: GYMC61_0099
• Symbol: rpoB
• ID: 8523895
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacillus sp. Y412MC61
• Kingdom: Bacteria
• Replicon accession: NC_013411
• Strand: +
• Start bp: 116111
• End bp: 119683
• Gene Length: 3573 bp
• Protein Length: 1190 aa
• Translation table: 11
• GC content: 54%
• Product: DNA-directed RNA polymerase subunit beta
• Protein accession: YP_003251281
• Protein GI: 261417599

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGACAGGCC GACTAGTTCA ATACGGGCGA CACCGCCAAC GCAGAAGCTA TGCACGCATC 
AGCGAAGTGC TGGAATTGCC GAACTTGATC GAAATTCAAA CGTCCTCCTA CCAATGGTTT 
CTCGATGAAG GGCTGCGGGA AATGTTTAGG GAAATTTCCC CGATTGAAGA CTTTTCCGGC 
AATCTCTCGC TTGAATTTAT CGACTATAGT TTAGGAGAAC CGAAATATAC GGTCGAAGAG 
GCGAAAGAAC GCGACGTTAC ATATGCGGCG CCGCTTCGCG TCAAAGTTCG CCTGATCAAT 
AAAGAAACGG GCGAAGTGAA GGAACAAGAC GTGTTTATGG GCGATTTTCC GCTCATGACG 
GAAACCGGAA CGTTTATTAT CAATGGGGCG GAACGCGTCA TCGTTTCCCA GCTCGTCCGT 
TCGCCAAGCG TCTATTACAG CGACAAAGTT GATAAAAACG GCAAACGCGG CTACTCGGCG 
ACAGTGATTC CGAACCGCGG CGCATGGCTT GAATATGAAA CCGATGCGAA AGACGTCGTT 
TACGTTCGCA TCGACCGCAC CCGTAAACTG CCGGTTACGG TGCTTCTCCG TGCGCTTGGG 
TTCAGCTCCG ACCAAGAAAT CATCGATCTG CTCGGTGACA ACGAATACTT GCGCAATACG 
CTTGAAAAAG ATAATACCGA CAGCACGGAA AAAGCGTTGA TTGAAATTTA CGAGCGTCTT 
CGTCCGGGAG AGCCGCCGAC GCTTGAGAAT GCGAAAAATT TGCTGGCGTC GCGCTTTTTT 
GATCCGAAGC GCTATGACTT GGCGAGCGTA GGCCGTTATA AAATCAATAA AAAACTTCAT 
ATTAAAAACC GCCTGTTCAA TCAGCGGCTC GCGGAAACGA TCATTGATCC CGAAACCAAG 
GAAGTCATCG CCGAAGCTGG AGCGATGATC GACCGCCGAA CGCTGAATCG CCTGCTCCCG 
TATTTGGAAA AAGGGGTCGG CTTACAGACA TACCGCCCGG CCGAAGGGGT GGTGGACGGG 
GACATTTCGG TGCAAACGAT CAAAATTTAT GCCCCGAATG ACCCGGATGG CGAAAAAGTG 
ATCAACGTCA TCGGCAACGG CTTCATCGCC GAGGATGTCA AACATATTAC ACCGGCTGAC 
ATCATTGCGT CGATCAGCTA TTTCTTCAAC TTGCTCCACG GCGTCGGCGA TACGGATGAC 
ATCGACCATT TAGGCAACCG CCGCCTCCGT TCGGTCGGCG AACTATTGCA AAACCAATTC 
CGCATCGGCC TGTCGCGCAT GGAGCGCGTC GTGCGCGAGC GCATGTCGAT CCAAGATACG 
AACACGATTA CGCCGCAGCA GCTGATCAAC ATCCGCCCAG TGATCGCGGC GATCAAAGAG 
TTTTTCGGCA GCTCGCAGCT GTCACAGTTC ATGGATCAAA CGAACCCATT GGCCGAACTG 
ACGCACAAGC GGCGTCTGTC CGCGCTTGGC CCTGGCGGAT TGACACGTGA GCGCGCTGGG 
TTTGAGGTGC GCGACGTTCA CTATTCGCAC TACGGGCGGA TGTGTCCGAT TGAAACGCCG 
GAAGGTCCGA ACATCGGACT CATCAACTCG CTGTCCACTT ACGCGAAAGT GAACAAGTTC 
GGCTTTATTG AAACGCCATA CCGGCGCGTC GATCCGGAAA CAGGGCGGGT GACGGACCAA 
ATCGATTATT TGACAGCCGA TGAAGAGGAC AATTACGTTG TAGCGCAGGC GAACGTACCG 
CTTGCGGAGG ACGGCACGTT CCTTGAAGAA AACGTTGTCG CCCGTTTCCG CGGCGAGAAC 
ATCGTCGTCA AGCGCGATCG CGTCGACTAC ATGGACGTTT CGCCGAAGCA AGTCGTCTCG 
GCAGCGACAG CGTGCATCCC ATTTTTGGAA AACGACGACT CGAACCGCGC GCTGATGGGA 
GCGAACATGC AGCGGCAAGC CGTGCCGCTG TTGGAACCGG AAGCGCCGAT CGTTGGCACG 
GGGATGGAGT ATGTTTCGGC GAAAGACTCG GGCGCAGCGG TCATTTGCAA GCACCGCGGC 
ATCGTCGAGC GCGTCGAAGC AAAGGAAATT TGGGTGCGTC GGCTGATTGA AGTGGACGGC 
AAAGAAGTCA AGGGTGATCT AGATAAATAT CGGTTGCTGA AATTCGTTCG TTCGAACCAA 
GGCACGTGCT ATAACCAGCG GCCGATCGTG AAAAAAGGCG ATATCGTTGA GAAGGGCGAA 
ATTTTGGCCG ATGGCCCGTC GATGGATAAG GGCGAATTGG CGCTTGGCCG CAATGTGCTT 
GTCGCCTTTA TGACATGGGA CGGTTACAAC TACGAAGACG CGATCATCAT GAGCGAACGG 
CTCGTCAAAG AAGACGTGTA TACATCCATT CATATTGAAG AGTATGAAGC CGAATCGCGC 
GATACGAAAC TCGGTCCGGA AGAAATTACG CGCGACATTC CAAACGTCGG CGAGGATGCG 
CTGAAAAACT TGGATGAACG CGGCATCGTC CGCATCGGCG CAGAAGTGAA AGACGGCGAC 
TTGCTCGTCG GCAAAGTGAC GCCAAAAGGA ATGACCGAGC TGACGGCGGA AGAGCGGCTT 
TTGCACGCGA TCTTCGGCGA AAAAGCGCGC GAGGTGCGTG ATACGTCGTT GCGCGTCCCG 
CACGGCGGCG GCGGCATCGT CCTTGACGTG AAAGTGTTCA ACCGCGAAGA CGGCGACGAG 
CTTCCGCCGG GTGTCAATCA ACTGGTGCGC GTCTATATTG TGCAAAAGCG GAAAATTTCC 
GAGGGCGACA AAATGGCAGG CCGCCACGGA AACAAAGGGG TTATTTCCCG CATTTTGCCG 
GAGGAAGATA TGCCCTTCTT GCCGGATGGC ACGCCGATTG ACATCATGTT AAACCCACTC 
GGCGTTCCGT CGCGGATGAA CATCGGGCAA GTATTTGAGC TGCACCTTGG CATGGCGGCG 
AAAAAACTCG GCCTGCACAT CGCCTCCCCG GTCTTTGACG GGGCGACGGA GGAAGACGTT 
TGGAACATCC TCGAAGAGGC AGGTCTAGCG CGCGATGCAA AAACGGTGCT GTATGACGGA 
CGGACGGGTG AACCGTTTGA TAACCGCGTG TCGGTTGGGA TCATGTACAT GATCAAGCTC 
GCCCACATGG TCGACGACAA GCTTCATGCC CGTTCCACCG GCCCGTACTC ACTCGTCACT 
CAACAGCCGC TTGGCGGCAA GGCGCAGTTC GGCGGCCAGC GCTTTGGTGA GATGGAAGTA 
TGGGCGCTTG AGGCGTATGG GGCGGCATAC ACGCTGCAAG AAATTTTGAC CGTCAAGTCC 
GACGATGTCG TCGGCCGTGT CAAAACGTAC GAGGCGATCG TCAAAGGGGA AAACATTCCG 
GAGCCGGGTG TGCCGGAGTC GTTTAAAGTG TTGATCAAAG AGCTGCAAAG CTTGGGCATG 
GACGTCACGA TTTTGACGAG CGATGAACAA GAAGTGAACA TGGAAAACTT TGATGATGAT 
GATGACCATG CACCGGATGC CATCATGGTG GACGTCAAAC CGGCCGAACG GGAAGAAGCC 
GGTGAAGAGA AAGATGCGGT GACGAAAGAA TAA 

 

Protein sequence

MTGRLVQYGR HRQRRSYARI SEVLELPNLI EIQTSSYQWF LDEGLREMFR EISPIEDFSG 
NLSLEFIDYS LGEPKYTVEE AKERDVTYAA PLRVKVRLIN KETGEVKEQD VFMGDFPLMT 
ETGTFIINGA ERVIVSQLVR SPSVYYSDKV DKNGKRGYSA TVIPNRGAWL EYETDAKDVV 
YVRIDRTRKL PVTVLLRALG FSSDQEIIDL LGDNEYLRNT LEKDNTDSTE KALIEIYERL 
RPGEPPTLEN AKNLLASRFF DPKRYDLASV GRYKINKKLH IKNRLFNQRL AETIIDPETK 
EVIAEAGAMI DRRTLNRLLP YLEKGVGLQT YRPAEGVVDG DISVQTIKIY APNDPDGEKV 
INVIGNGFIA EDVKHITPAD IIASISYFFN LLHGVGDTDD IDHLGNRRLR SVGELLQNQF 
RIGLSRMERV VRERMSIQDT NTITPQQLIN IRPVIAAIKE FFGSSQLSQF MDQTNPLAEL 
THKRRLSALG PGGLTRERAG FEVRDVHYSH YGRMCPIETP EGPNIGLINS LSTYAKVNKF 
GFIETPYRRV DPETGRVTDQ IDYLTADEED NYVVAQANVP LAEDGTFLEE NVVARFRGEN 
IVVKRDRVDY MDVSPKQVVS AATACIPFLE NDDSNRALMG ANMQRQAVPL LEPEAPIVGT 
GMEYVSAKDS GAAVICKHRG IVERVEAKEI WVRRLIEVDG KEVKGDLDKY RLLKFVRSNQ 
GTCYNQRPIV KKGDIVEKGE ILADGPSMDK GELALGRNVL VAFMTWDGYN YEDAIIMSER 
LVKEDVYTSI HIEEYEAESR DTKLGPEEIT RDIPNVGEDA LKNLDERGIV RIGAEVKDGD 
LLVGKVTPKG MTELTAEERL LHAIFGEKAR EVRDTSLRVP HGGGGIVLDV KVFNREDGDE 
LPPGVNQLVR VYIVQKRKIS EGDKMAGRHG NKGVISRILP EEDMPFLPDG TPIDIMLNPL 
GVPSRMNIGQ VFELHLGMAA KKLGLHIASP VFDGATEEDV WNILEEAGLA RDAKTVLYDG 
RTGEPFDNRV SVGIMYMIKL AHMVDDKLHA RSTGPYSLVT QQPLGGKAQF GGQRFGEMEV 
WALEAYGAAY TLQEILTVKS DDVVGRVKTY EAIVKGENIP EPGVPESFKV LIKELQSLGM 
DVTILTSDEQ EVNMENFDDD DDHAPDAIMV DVKPAEREEA GEEKDAVTKE