Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeg_2054 |
Symbol | |
ID | 8492063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ammonifex degensii KC4 |
Kingdom | Bacteria |
Replicon accession | NC_013385 |
Strand | + |
Start bp | 2048356 |
End bp | 2049057 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 646360044 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_003239982 |
Protein GI | 260893885 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGTTAA TCTGGCGTAA TCTTCCTTAT TTGCTCCTAG GAGCGGTAGA AACCTTAAAG ATAACTTGCT TGGCCGTTTC TCTGGGTTGC GTTTTCGGCC TCATTGTGGG GTTAGGGAGG CTTTCTCGGA ACCGGGTGAT CCGCTTCCTC TCCACCTGTT ACGTGGACTT CCTGCGGGGA ACCCCGCTTT TGGTGCAGAT CTTCATCGTC TACTTCGGCC TCCCGCAGCT GTTAGAACAG CTGCAGAACT TCCTGGTGGA GAGCTGGGGC CTGCCCCGGC TCTTCACCAG TACCCATATT CCCGCCTTCG CTGCCGCCAT CATCGCCACC AGTCTGAACA GTGGTGCTTA CGTAGCTGAG ATCTTCCGCG CCGGCATCCA GTCCATACCT AAGGGGCAGA TGGAGGCTGC CCGCAGTCTA GGTATGACCT ACCGTCAGGC CATGCGCTAC GTGATTCTTC CCCAGGCCTT CCGGAACATC ATTCCGCCTC TGGGCAACGA GTTCATCGCC ATGCTGAAAG ATACTTCTCT GCTTTCGGTG ATCGGGATCG TGGAGCTCAC CCGGCGGGGG CAGATCATAA TTGCCAGCAC CTTCCGCCCC TTTGAGATAT GGCTGACCGT AGCCCTCATT TATTTGATCC TTACCTTGTC CATATCCCGC CTGGTAGACT ATTGGGAGAA GAGATTGCGG GTGAGGACCT GA
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Protein sequence | MKLIWRNLPY LLLGAVETLK ITCLAVSLGC VFGLIVGLGR LSRNRVIRFL STCYVDFLRG TPLLVQIFIV YFGLPQLLEQ LQNFLVESWG LPRLFTSTHI PAFAAAIIAT SLNSGAYVAE IFRAGIQSIP KGQMEAARSL GMTYRQAMRY VILPQAFRNI IPPLGNEFIA MLKDTSLLSV IGIVELTRRG QIIIASTFRP FEIWLTVALI YLILTLSISR LVDYWEKRLR VRT
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