Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeg_2025 |
Symbol | |
ID | 8492033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ammonifex degensii KC4 |
Kingdom | Bacteria |
Replicon accession | NC_013385 |
Strand | - |
Start bp | 2024543 |
End bp | 2025301 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 646360014 |
Product | RNA polymerase, sigma 28 subunit, FliA/WhiG |
Protein accession | YP_003239953 |
Protein GI | 260893856 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCCATCG ATCAGGCCTG GCGGGCCTAC AAGCAGAGGG GGAACACTAC GAGCAAGGAG GAGCTGGTAA GGCGCTACCT TCCCCTGGTG AAGTACCTGG TGGGCCGGCT GGCGGTGCGC CTCCCGCCCT GGGTCTCGCT GGAGGACATA GAGGGGGCGG GTATCCTGGG GTTGCTGGCC GCTATGGAGC GCTACGACCC CTCCCAGGGA GTGGAGTTCG AGTCCTACGC CCGCTACCGC ATCTGGGGAG CTATGCTGGA CGAGGTGCGG CGCTGGGCCC GCTTCTCCCG ACGCACCTGG CAGCAGATGC AGGCGGTGCT CAAGGTGCAG GAGCGCTGGG AGCGGGAGAA GGGCTGCCGG CCTAAGGTAG AAGACGTGGC TCAGGAACTG GGCTGGGAGC CGGCGCAGGT GGACCGGCTG GGCCGTTACT TTGCCGCCTT CAACTCCTTT TCTCTGGAGG AGGTCCGGTC GGCGGAGGGG CGCTCCCCCT GGGAGGAATT CCTGGCCGAC CCCAAAGGTC AAGACCCGCT GGAGGAACTC CTGGAAAAAG AAGATCTGGG GCGCCTGGCG GAGGCGATAG GCCGTCTGGA GGAGCGCCTG CAGCTCATCC TGGCCCTCTA CTATCAGGAA GGGCTTACCC TCAGGGAGAT AGGCGAGGTG CTGGGGATCT CGGAGTCGCG CGTTTGCCAG CTCCATTCTC GGGCCTTAAC CAAGCTAAGG GAAATTCTGG CAGAAGAAAG GGGGAAGGAG AAGAGTTGA
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Protein sequence | MAIDQAWRAY KQRGNTTSKE ELVRRYLPLV KYLVGRLAVR LPPWVSLEDI EGAGILGLLA AMERYDPSQG VEFESYARYR IWGAMLDEVR RWARFSRRTW QQMQAVLKVQ ERWEREKGCR PKVEDVAQEL GWEPAQVDRL GRYFAAFNSF SLEEVRSAEG RSPWEEFLAD PKGQDPLEEL LEKEDLGRLA EAIGRLEERL QLILALYYQE GLTLREIGEV LGISESRVCQ LHSRALTKLR EILAEERGKE KS
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