| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1982 |
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| Symbol | |
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| ID | 8491989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | - |
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| Start bp | 1986548 |
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| End bp | 1987660 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 646359971 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_003239911 |
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| Protein GI | 260893814 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD
[TIGR01508] 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGAACC TGAAAGAAGA CGAATTTTTC ATGCGGCGGG CCTTGGAGCT CGCCTTGAAG
GCCCGGGGGA GGACCAGCCC TAACCCCATG GTGGGGGCGG TGCTGGTCAA AGAGGGGCGC
GTGATCGCCG AGGGTTACCA CCGCCGGGCT GGGATGCCTC ATGCCGAGAT AGAAGCCCTG
CGGGCGGCCG GGGAAGAGGC GCGGGGGGCC ACGCTTTACG TCAACCTGGA GCCCTGCTGC
CATGTAGGAC GCACCGGCCC CTGCACGGAG GCCATAATCG CCGCGGGGAT AAAGCGGGTG
GTGGTGGCCA TGGAGGACCC CAACCCTCTG GTGGCGGGGA AGGGGATAAA GATCTTGCGG
GAAGCGGGGC TAGAAGTGAC GGTGGGGGTC CTGGAGCAGG AGGCCCGGCG GTTGAACGAG
GTTTTTGTAA AGTTCATCAC CACCCGCGAG CCTTTCGTGG TGCTCAAAGT GGCCATGACT
CTGGACGGCA AGATAGCCAC CAGCACGGGG GAGGCCCGCT GGATAACAGG CCCGGAAGCC
CGGGCTTACG TGCACGAGCT GCGCGACACT TACGACGCCA TACTGGTGGG GAAGGGTACG
GTGCTGAAGG ACGACCCTTC CTTGACCGCG CGCCTTCCAG GGGCACGCGA CCCGGTGCGG
GTTATCCTTT CAAGCCTCGC CGACCTTCCC CTTTCCGCCC GGGTGCTCAA CCTCAATTCC
TCTGCCCCCA CCTGGGTAGC GGTCACGGAG CAGGCTCCTC CTTCTCGGAT TAAGGCCTTG
CAGGGTAAAG GAGCAGAAGT ACTGGTGTGC GGTCCCGGCC CGCAGGTGGA CTTGAAGCTT
CTGCTCAAGG AGCTGGGCAG GCGGGAGATA ACCGGCGTGC TGGTAGAAGG GGGCGGGACG
GTAAACGCCA GTTTCTTGGC GAACCGGCTG GTGGACAAGG TGATCTGGAT GGTGGCGCCC
AAGATCTTCG GGGGGACGAA GGCCCCCGGG CCGGTGGGAG GGGAAGGGGT GGAGCACCCC
GACCGGGCCC TGCGACTGAA AGACTTAACG GTAAAAAAGC TGGGGGCCGA TTTTTGTTTC
GAGGGCTACC CGGAATACCC GGAGGAGAGG TAG
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| Protein sequence | MENLKEDEFF MRRALELALK ARGRTSPNPM VGAVLVKEGR VIAEGYHRRA GMPHAEIEAL
RAAGEEARGA TLYVNLEPCC HVGRTGPCTE AIIAAGIKRV VVAMEDPNPL VAGKGIKILR
EAGLEVTVGV LEQEARRLNE VFVKFITTRE PFVVLKVAMT LDGKIATSTG EARWITGPEA
RAYVHELRDT YDAILVGKGT VLKDDPSLTA RLPGARDPVR VILSSLADLP LSARVLNLNS
SAPTWVAVTE QAPPSRIKAL QGKGAEVLVC GPGPQVDLKL LLKELGRREI TGVLVEGGGT
VNASFLANRL VDKVIWMVAP KIFGGTKAPG PVGGEGVEHP DRALRLKDLT VKKLGADFCF
EGYPEYPEER
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