| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1980 |
|---|
| Symbol | |
|---|
| ID | 8491987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1984638 |
|---|
| End bp | 1985873 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 646359969 |
|---|
| Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| Protein accession | YP_003239909 |
|---|
| Protein GI | 260893812 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAGT TCAACACCGT TGAAGAAGCC ATCGCCGACA TAAGAGAAGG GAAGATGGTA
ATCGTCGTAG ACGACGAGGA TCGGGAAAAC GAAGGGGACT TGGTAATGGC AGCAGAGAAG
GTGACGCCGG AGGCCATCAC CTTCATGGCC ACCTACGGGC GGGGCCTCAT CTGCGTGCCA
CTTACCGAGG AACGAGCCGA CGAACTGGAC CTGGCCCCCA TGGTTCCTTA CAATACCGAT
CCCCACGGCA CGGCCTTCAC CGTCTCGGTG GACGCGCGGG GGGTGACTAC TGGCATTTCT
GCGCACGAGC GGGCCTACAC CATAAAGAAG CTCATCGACC CTAAGGCGGG CCCGCACGAC
TTCCGGCGCC CGGGGCACGT CTTCCCCCTG CGGGCCAAGA AGGGCGGAGT TTTGCGCCGG
GCCGGGCACA CCGAGGCGGC GGTGGATCTG GCCCGTCTGG CTGGCCTTTA TCCGGCTGGG
GTCATCTGCG AGATCATGAA GGACGACGGA ACGATGGCGC GGGTGCCGGA ACTCATGGAG
TTTGCCCGGC GCCACAACCT CAAGATCATC ACTATTGCCG ACCTCATAAG CTACCGGCGG
CGCACCGAGA AGCTGGTGAG GCGGGTGGGG GCGGCGCGGC TGCCCACCAA GTACGGAGAG
TTCACAGCGG TGGCTTATGA AAGCCTGCTC GACGGCAAGG GACACCTGGC GCTGGTAATG
GGGGATCTCT CCTCGGTGGA GGCGCCTCTC GTGCGGGTGC ACTCCGAGTG CCTTACCGGC
GACGTTTTCG GCTCCCTACG CTGCGATTGC GGCCAGCAGA TAGAGCGGGC CCTGCGGATG
ATCGCGGCGG AAGGGGTGGG GGTGCTCTTG TACATGCGCC AGGAGGGGCG CGGCATCGGG
TTACTCAATA AGATCCGGGC TTATGAACTG CAGGACCGGG GCAAGGACAC GGTGGAGGCT
AACGAGGCTT TGGGCTTTCC TCCCGACTTG CGCGACTACG GCATAGGAGC GCAGATCCTG
GTGGACCTGG GCCTGAAGAA GATCCGCCTT CTGACCAACA ACCCCCGTAA GATAAAGGGC
ATCCAGGGTT ACGGCCTAGA GATCGTGGAG CGAGTTCCCC TGGAGGTGCC GCCGGGGAAG
GAGAACGGCT TTTACCTGGC CACCAAAAAG AAAAAACTCG GTCACCTCTT AACCCTGGTA
GACCAGCAGG AAGAAGGGAG TAAGAGCAAT GCCTAG
|
|---|
| Protein sequence | MFKFNTVEEA IADIREGKMV IVVDDEDREN EGDLVMAAEK VTPEAITFMA TYGRGLICVP
LTEERADELD LAPMVPYNTD PHGTAFTVSV DARGVTTGIS AHERAYTIKK LIDPKAGPHD
FRRPGHVFPL RAKKGGVLRR AGHTEAAVDL ARLAGLYPAG VICEIMKDDG TMARVPELME
FARRHNLKII TIADLISYRR RTEKLVRRVG AARLPTKYGE FTAVAYESLL DGKGHLALVM
GDLSSVEAPL VRVHSECLTG DVFGSLRCDC GQQIERALRM IAAEGVGVLL YMRQEGRGIG
LLNKIRAYEL QDRGKDTVEA NEALGFPPDL RDYGIGAQIL VDLGLKKIRL LTNNPRKIKG
IQGYGLEIVE RVPLEVPPGK ENGFYLATKK KKLGHLLTLV DQQEEGSKSN A
|
|---|
| |