| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1915 |
|---|
| Symbol | |
|---|
| ID | 8491920 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 1922463 |
|---|
| End bp | 1923803 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 646359903 |
|---|
| Product | RNA-directed DNA polymerase (Reverse transcriptase) |
|---|
| Protein accession | YP_003239845 |
|---|
| Protein GI | 260893748 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3344] Retron-type reverse transcriptase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.552101 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATCCGC GGGGAACTGT GGGAGTGCCG AGCACCCTCC CGGCACCGAT GGAGCAACTC
GGCGGAGACC CACGGTACTG CCTGATGGAA CAGGTAGTCG AGCGGGCCAA CATGACGAAG
GCCCTGCGCC GAGTGGAGCG GAACGGAGGC GCAGCCGGAG TGGATGGGAT GGAGCCAGAA
GCCCTACGCT CCTACCTGAA AGAACACTGG CCGCGCATCA AGGAAGAACT GCTCGCGGGG
ACCTACCGGC CCATGCCGGT GCGCCGGGTC GAAATCCCGA AACCCGGTGG CGGCGTGCGG
CTGTTGGGCA TCCCCACGGT GCTGGACCGC CTGATCCAGC AGGCCCTGCT TCAGGTACTG
ACACCCATCT TTGACCCCGG GTTTTCCCCA CACAGCTACG ACTTCCGCCC GGGGCGCAGC
GCCCACCAGG CGGTGGAGCA AGCCCGCAGG TACGTGGCCC AGGGCTACCG GCACGTGGTG
GACCTCGACC TGGCACAATT CTTCGACCGC GTCAACCATG ACCTCCTGAT GGCCAGGGTG
GCGCGGAAGG TGAAGGACAA GCGGGTACTC AAGTTAATAC GGGCCTACCT TCAGGCCGGA
GTCATGATTA ATGGCTGCTG CGTACGCACG GAGGAGGGCA CCCCGCAGGG AGGGCCGCTG
AGCCCGCTTC TGGCCAATAT CATTCTGGAC GACCTGGACA AAGAACTGGA GCGGCGCGGC
CACAAGTTCG TAAGGTACGC CGATGACAGC AACGTTTACG TAAGAAGCTG CCGCGCCGGC
CAGCGGGTGT TCGAGAGCCT GAAGCGCTTC CTGGAGCAAC GGCTCAAGCT ACGGATAAAC
GAGGAAAAGA GCGCCGTGGA CTACGCCTGG CGGCGCGGAA TCCTCGGCTT TTCCTTCACC
TGGGAAAAGG AGCCGCGCAT CCGGCTGGCA CCCCAGACGG TGAAGCGGTT CAAGCAGCGC
ATCCGCTGGC TCACCAAGCG CAGCCGCAGT GTGAATATGG CCGAGCGTCT GGCGCGCCTC
AACGAATACC TCAAGGGATG GATGGGCTAC TTTCGGCTGA TAGAGACCCC CAGCACACTG
CAGGCCCTGG ACGAGTGGAT ACGGCGGCGA CTGCGCATGT GTCTGTTGAA GCAATGGAAG
CGGCCCCGCA CCAGACGACG CAACCTGGTG GCCCTGGGCA TTCCTGAGGA CTGGGCGCGC
CACATTAGCG GTTCGCGCAA AGGCTGCTGG CGGCTGGCGA ACACGCCCCA GGTGAACAAA
GCCCTTGGCC TTGCCTACTG GCGCAGCCAA GGGCTGGTTA GCTTGGTCGA CCGGTACCGT
GAACTTCGTA GTGCCTCATG A
|
|---|
| Protein sequence | MNPRGTVGVP STLPAPMEQL GGDPRYCLME QVVERANMTK ALRRVERNGG AAGVDGMEPE
ALRSYLKEHW PRIKEELLAG TYRPMPVRRV EIPKPGGGVR LLGIPTVLDR LIQQALLQVL
TPIFDPGFSP HSYDFRPGRS AHQAVEQARR YVAQGYRHVV DLDLAQFFDR VNHDLLMARV
ARKVKDKRVL KLIRAYLQAG VMINGCCVRT EEGTPQGGPL SPLLANIILD DLDKELERRG
HKFVRYADDS NVYVRSCRAG QRVFESLKRF LEQRLKLRIN EEKSAVDYAW RRGILGFSFT
WEKEPRIRLA PQTVKRFKQR IRWLTKRSRS VNMAERLARL NEYLKGWMGY FRLIETPSTL
QALDEWIRRR LRMCLLKQWK RPRTRRRNLV ALGIPEDWAR HISGSRKGCW RLANTPQVNK
ALGLAYWRSQ GLVSLVDRYR ELRSAS
|
|---|
| |