| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1825 |
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| Symbol | |
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| ID | 8491829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | - |
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| Start bp | 1821104 |
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| End bp | 1823149 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 646359818 |
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| Product | excinuclease ABC, B subunit |
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| Protein accession | YP_003239761 |
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| Protein GI | 260893664 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0508947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGCTTT TTAAGCTTAG GGCCGACTTT GCTCCGGCAG GGGATCAGCC CCAGGCCATC
GCCAAGCTGG TGGAAGGGGT CAGAAAAGGT TACCGTATGC AGACCCTGCT GGGAGTTACC
GGTTCGGGCA AAACTTTTAC TATGGCCAAC GTCATCGCCC AGCTCAACCG GCCTACCCTG
GTGATAGCTC CCAACAAGAC CCTGGCGGCC CAGCTCTGCA GCGAGTTCAA AGAATTCTTC
CCGGAAAATG CGGTGGAGTA TTTCATAAGC TACTACGACT ACTATCAGCC GGAGGCCTAC
CTGCCGCAGG CCGATCTCTA CATAGAGAAA GACGCCCTCA TCAACGAAGA GATAGACAAG
CTCCGGCACG CGGCCACGGC AGCGGTTCTG GAGCGTCGCG ACGTCATCGT AGTGGCCAGC
GTGTCCTGCA TCTACAGCCT GGGTAATCCG GTAGATTACC GCGATCAGGT AGTTTCCCTG
CGGCGAGGAG AGTGCTACGA CCGCGATAGC ATACTGCGGA AGCTCGTCCG CATCCGCTAC
GAGCGCACCG AAGGGGATTT CACCCGGGGT AAGTTCAGGG TGCGGGGGGA TGTGCTCGAC
GTTTTCCCCG CCTCCACTTC CGAAAGGGCC ATCCGGGTGG AGTTCTTCGG GGACGAGGTA
GAGCGCATCC TGGAATTTGA CCCGCTGACC GGCGACATCC TAGGGGAGAG GTACCACGTT
TCTTTCTTCC CGGCCACCCA CTATGTCACC GCCCCGGAGC GTCTGGAAAA TATCATTGCG
GCCATCGAGG AGGAACTGGC CGAGCGGGTA GCTTGGTTCA AAGCTCAGGG GCGCCTTCTG
GAGGCCCAGC GGCTGGAGAC CAGGACGCGC TACGATCTGG AAATGCTGCG GGAGGTAGGC
TACTGTAAGG GCATCGAAAA CTACTCTCGC TACTTGACGG GCAGGGCGCC GGGCGAGCCC
CCTTACACCC TGCTCGACTA CTTCCCTCCA GACTTCCTGG TCTTCATCGA CGAGTCGCAC
GTGACCGTGC CACAGCTGCA CGGGATGTAC GAGGGGGACC GTTCCCGCAA GGAGTCCCTG
GTAGAGTACG GTTTCCGGCT CCCCTCGGCC TTCGACAACC GCCCCCTCAA GTTCGAGGAG
TTTATCGAGC GGGTAAACCA GGTGATCTTC GTCTCCGCCA CCCCCGGTCC TTATGAACTG
GAGCACAGTG AGCAGATAGT GGAGCAGATC GTGCGTCCCA CCGGCCTGGT GGATCCCCCC
ATGGTGGTGC GGCCGACCAA GGGGCAGATA GACGACTTAC TGGGGGAGAT AAGGACGCGG
GTGGCACGAG GGGAGAGGGT GCTGGTGACC ACCCTGACCA AGCGGATGGC GGAGGACCTG
GCCGATTACC TACGGGAGAT GGGGGTGAAA GTGCGGTACC TCCACGCCGA TATCGACGCT
TTAGAGCGCA TGGCCATTAT CCGGGATCTG CGCCTGGGGG TTTTTGACGT CCTGGTGGGA
ATAAACCTGC TCCGCGAGGG GCTGGACCTG CCCGAGGTCA GCTTGGTGGC CATCTTGGAC
GCCGATAAAG AGGGCTACCT GCGTTCGGAG CGCTCGCTTA TCCAGATAGC GGGGCGGGCG
GCTCGCAACG TCAACGGCCT GGTGATCCTT TACGCCGACC GGATCACCGA GTCGATGCGC
CGGGCCATAG AGGAAACGGA GCGCCGCCGG CGCCTGCAAA TAGAATACAA CCAGAAGCAC
GGTATCGTCC CCCGCACGGT AGAGAAACCG GTGCGGGAAG TCATCGAGGC TACCAAGGTG
GCGGAGGAGA AGGGCGTTTA CGAAGTCCGA CCCAAGGAGC TCCCCACCTC CAAGCTCAAA
TCCCTAGCGG CGGCCTACGA GCGACAGATG CGCGAGGCGG CTAAGAGCCT GGATTTCGAG
TTGGCCGCGC AGCTGCGCGA CATCTGGCTG GAGCTCAGGG CGGAGCTCGT GGCGCGGGGA
GTGGAGGTGC GCGGAGGAAG GGGTAGAAGT AAAAAGAGGT GTGCGGCATG CAAGACGCCA
TTATAG
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| Protein sequence | MGLFKLRADF APAGDQPQAI AKLVEGVRKG YRMQTLLGVT GSGKTFTMAN VIAQLNRPTL
VIAPNKTLAA QLCSEFKEFF PENAVEYFIS YYDYYQPEAY LPQADLYIEK DALINEEIDK
LRHAATAAVL ERRDVIVVAS VSCIYSLGNP VDYRDQVVSL RRGECYDRDS ILRKLVRIRY
ERTEGDFTRG KFRVRGDVLD VFPASTSERA IRVEFFGDEV ERILEFDPLT GDILGERYHV
SFFPATHYVT APERLENIIA AIEEELAERV AWFKAQGRLL EAQRLETRTR YDLEMLREVG
YCKGIENYSR YLTGRAPGEP PYTLLDYFPP DFLVFIDESH VTVPQLHGMY EGDRSRKESL
VEYGFRLPSA FDNRPLKFEE FIERVNQVIF VSATPGPYEL EHSEQIVEQI VRPTGLVDPP
MVVRPTKGQI DDLLGEIRTR VARGERVLVT TLTKRMAEDL ADYLREMGVK VRYLHADIDA
LERMAIIRDL RLGVFDVLVG INLLREGLDL PEVSLVAILD ADKEGYLRSE RSLIQIAGRA
ARNVNGLVIL YADRITESMR RAIEETERRR RLQIEYNQKH GIVPRTVEKP VREVIEATKV
AEEKGVYEVR PKELPTSKLK SLAAAYERQM REAAKSLDFE LAAQLRDIWL ELRAELVARG
VEVRGGRGRS KKRCAACKTP L
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