| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1758 |
|---|
| Symbol | |
|---|
| ID | 8491761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1750919 |
|---|
| End bp | 1752028 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 646359753 |
|---|
| Product | alanine racemase |
|---|
| Protein accession | YP_003239697 |
|---|
| Protein GI | 260893600 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0787] Alanine racemase |
|---|
| TIGRFAM ID | [TIGR00492] alanine racemase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTGTC CCGTCTGGGC TGAAGTTAGC CGGGAGGCCC TGCGGCACAA CCTGCGGGTA
GTAAAGGAGA TAGTGGGGCC CTCGGTCCGG GTAATGGGGA TAGTGAAAGC CAATGCTTAC
GGGCACGGGC TGGTGCCGGT GGCCAAGATC TTGGAGGAGG CGGGCGTAGA CTGGCTGGGA
GTGGCGCGAG GGCAGGAAGC CTTGGAGCTC AGACGTGAGG GGGTGGACCA CCCCATTTTA
GTTTTGGGGT ACGTGCATCC GGCCGAATGC CCTGCTCTTC TGGCCCAGGA GGTAACCCTT
ACCGCCTACA GCGAAGACAT TTTGCGGGAG TGGGCGGGAA TAGCGCAGCG GGAGGGCAAG
CGGCTGAAGG TGCACTTTAA AGTGGACACG GGCATGGGGA GGCTGGGCTT TAAAGCCGAA
CCCGCCGGTA AGGAGGCCAT TCTGCGCTTG GCTGCTCTTC CCCGGGTGGA AGTAGAAGGC
ATTTATACCC ACTTCGCCTG CGCTGACTTG CCCGACGAAA AGCCGACCCG CGACCAGCTG
GAAAAGTTTA TAATGCTATT AGAGGAGCTA GAGCGAGCAG GTCTCTCCAT TCCTCTGCGG
CACGCGGCCA ACAGCGCGGC TCTGATCCGC TTTCGGGAAT CGCACCTGGA TATGGTGCGG
CCGGGAATCA TGCTTTACGG GCTTCTTCCT TTTCCTTCGG CCCGGGTGAA TCTCTCCCCG
GCCATGACTT TGAAGGCCCG GGTGGTGCAG GTGAAGCGGG TGGGAGCGGG CTTCCCGGTG
AGCTACGGCT GGACCTACCG TACCTCTCGG CCTTCCCTTC TGGCCACGGT GGCGGCGGGT
TACGGTGACG GCTACAGCCG CCTTTTGAGC AATAAGGGAG AGGTCTTGCT GCGTGGGCGT
CGCGTGCCGG TGGTGGGGAG GGTGTGCATG GACCAGCTGA TAGTGGATGC CACCGAACTG
GGAGAGGTGG AACCGGGCGA AGAAGTGGTG CTCTTCGGCA GGCAAGGAGA GGTCTCCCTG
CCGGTAGAAG AACTGGCGGA GAAAATCGGC ACCATCAACT ATGAGGTAGT TTGCGCCGTA
AGTGCCAGGG TACCGCGCGT TTACCTCTAA
|
|---|
| Protein sequence | MDCPVWAEVS REALRHNLRV VKEIVGPSVR VMGIVKANAY GHGLVPVAKI LEEAGVDWLG
VARGQEALEL RREGVDHPIL VLGYVHPAEC PALLAQEVTL TAYSEDILRE WAGIAQREGK
RLKVHFKVDT GMGRLGFKAE PAGKEAILRL AALPRVEVEG IYTHFACADL PDEKPTRDQL
EKFIMLLEEL ERAGLSIPLR HAANSAALIR FRESHLDMVR PGIMLYGLLP FPSARVNLSP
AMTLKARVVQ VKRVGAGFPV SYGWTYRTSR PSLLATVAAG YGDGYSRLLS NKGEVLLRGR
RVPVVGRVCM DQLIVDATEL GEVEPGEEVV LFGRQGEVSL PVEELAEKIG TINYEVVCAV
SARVPRVYL
|
|---|
| |