| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1727 |
|---|
| Symbol | |
|---|
| ID | 8491730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1718867 |
|---|
| End bp | 1720702 |
|---|
| Gene Length | 1836 bp |
|---|
| Protein Length | 611 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 646359725 |
|---|
| Product | DNA primase |
|---|
| Protein accession | YP_003239669 |
|---|
| Protein GI | 260893572 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0358] DNA primase (bacterial type) |
|---|
| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGCGGTT ACGTGCCGCC GGAATTCGTT AAAGAGGTGC TGGACCGCAC CGACATCGTG
GCCCTGGTGG GTGAGTACGT TCGCTTGAAA CGCCAGGGCA AAAACTACGT AGGGCTCTGC
CCCTTCCACG CCGAGCGCAC GCCTTCCTTC ACCGTCTCGC CAGAAAAACA GTTTTTTTAC
TGTTTCGGCT GTGGCGTAGG CGGTGACGCC TTAAAGTTTT TGATGCTGCA GGAAAAGCTA
GATTTTTTAG AGGCGCTGGA GAGGCTGGCC CTGCGCGCGG GGTTGAGCCT CCCCTCGCAG
AGCCGAGATC CCGCCTGGCT GGCCCGCCGC CGGGAGCTGG AGGAGGGCGA AGAACTCAAC
CGCCTAAGCC TGGAATTCTT CACTGCTTCC CTGTGGGGGG AGAGGGGGGA GCCGGCGCGG
CGCTACCTGG AGGAGCGAGG GGTGAGCGAG GAAATAGCCC GGCGCTTTTC CCTGGGCTAT
GCCCCCCCGG AGGAAGAAGC TCTGCTTCGC TACCTTCGGG CAAGGGGGAT AACCAAAGAA
GCGGCGGTGA AGTGGGGCCT GGCCTCCAGG ACCTCTGCTG GCCGAGTGGT GGACCGCTTC
CGCGGAAGGC TCATCTTCCC CATCTTTGAT CCGCAGGGTA AGGTAGTGGG ATTCGGCGGG
CGGGCGCTGG TGTCTTACCT CCAGCCCAAG TACCTCAACT CGCCGGAGAC CCCGCTCTTT
AACAAGCGAA ATGAGCTTTA TGGTCTTTAC CAGGCCAAGG ATGCCATAAG GGCTGCTGGC
TTCGCCGTGT TAGTCGAGGG CTACCTCGAC GCCATAACTT TACACCAGTT CGGCTTCGGC
TATGCAGTGG CCAGCTTGGG CACTAGCCTC ACGCAGGAGC AGGTGCGCCT ACTTTCCCGC
TATACCGGGA AAGTGTACAT TGCCTATGAC AGCGACACCG CCGGGGAGGC GGCCACCTGG
CGGGGGCTTG ACATTCTGGC CGGTGCGGGG CTGGAGGTCC TGGTGGTGGA GTTGCCGCAG
GGGAAAGACC CGGACGAGTT CCTGCGCGCT CTGGGCCCGG CGGCCTGGGA AGCTAGCTTA
GCCTCTGCCC TGCCCCTCCT CGAGTACAAG GGCAAAAAGC TCATGGCCGG GGGCCTGGTA
ACGGCCCGAG ATAAGCTTAA GGCGCTGCGG GCCCTTCTTC CCAACCTGGC CTGCCTGCGC
ACCTTGCCCG AGCGGGAAGA GGGCATCCGC CTGGTCAGCC GCATAACTGG TCTTAGCTGG
GAAGTAGTCC GGGATGAACT CTTACGCTTC ACCGGGGAGG AAGAGGTTAC CACTCGGCTA
AAAAGCGACA AAAGTGCTAA AAATAAGCAC GAAGCCCTTG AGTCTCGCGC CTGCTTCGCC
GCAGAAAGGG GGCTCTTGCA GGCTCTATTC TGCCGGCCTG AGATCCTGGC GGAGGTAGAG
GAGGCGGGCG GGGAAGAGCT CTTCACCCAC CCTCCCTGCC GGGCAGTATA CTCGGCCCTT
AAGGAGGCGC TGGCGGCGGG AGAGGACATA TCACCCACGC ACTTGGCCAG CCGTCTGCCG
GAGGAGGCTT TGGATGCGGC GGCAGGAATT TTGGTAGGGG AAGAAGAAAG TCCACCCTGG
AAGGATTGTC TTCGCTTCCT GAGGATGAAC TTGGTCAGAC AGAAGCGCAA GCAACTGGCC
GGGAAGCTCA GCCTGGCCGA GGCCAGAGGA GATGAGGAGG AAGTCAGGCG TTGTCTAGAG
GAACTTCAGG CTCTGGTAAA TCTCGAGCGG AAGGGAGGGG AAAGAGGAAA TGAGCGGAAA
GGAGAACCGA GCCGAGCGGC AAGAGTATCA GAATGA
|
|---|
| Protein sequence | MRGYVPPEFV KEVLDRTDIV ALVGEYVRLK RQGKNYVGLC PFHAERTPSF TVSPEKQFFY
CFGCGVGGDA LKFLMLQEKL DFLEALERLA LRAGLSLPSQ SRDPAWLARR RELEEGEELN
RLSLEFFTAS LWGERGEPAR RYLEERGVSE EIARRFSLGY APPEEEALLR YLRARGITKE
AAVKWGLASR TSAGRVVDRF RGRLIFPIFD PQGKVVGFGG RALVSYLQPK YLNSPETPLF
NKRNELYGLY QAKDAIRAAG FAVLVEGYLD AITLHQFGFG YAVASLGTSL TQEQVRLLSR
YTGKVYIAYD SDTAGEAATW RGLDILAGAG LEVLVVELPQ GKDPDEFLRA LGPAAWEASL
ASALPLLEYK GKKLMAGGLV TARDKLKALR ALLPNLACLR TLPEREEGIR LVSRITGLSW
EVVRDELLRF TGEEEVTTRL KSDKSAKNKH EALESRACFA AERGLLQALF CRPEILAEVE
EAGGEELFTH PPCRAVYSAL KEALAAGEDI SPTHLASRLP EEALDAAAGI LVGEEESPPW
KDCLRFLRMN LVRQKRKQLA GKLSLAEARG DEEEVRRCLE ELQALVNLER KGGERGNERK
GEPSRAARVS E
|
|---|
| |