| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1569 |
|---|
| Symbol | |
|---|
| ID | 8491564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1561306 |
|---|
| End bp | 1562784 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 646359562 |
|---|
| Product | UDP-N-acetylmuramyl-tripeptide synthetase |
|---|
| Protein accession | YP_003239514 |
|---|
| Protein GI | 260893417 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
|---|
| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAAATAA TTGTTTTAGC GGCAGGTGGT GAGCCGACGC TGGAAAGAAT AATGAAGCTA
AACCCCAGAG GATTGGCTTA CGACTCGCGG CGGGTAGAAA AAGGGTACAT CTTTTTTGCC
ATCAAGGGAC TGGTCAGGGA CGGGCACGAT TTCATCCCCG AGGCCGTAGC GCGGGGGGCT
ATAGGGATAG TGGCGGAAAG GAAGGTAGAG GTTCCGCCGG GGGTGGTGCT GGAGGTGGTA
CCCAATACCC GGCGGGCCTT GGCCTGGGCG GCAGCGCAGT TTTACGGGCA CCCCAGCCGT
AAACTACACG TGGTGGGGGT GACGGGAACC AACGGTAAGA CCACCACCAC CCATCTCCTG
AGCTCCCTCT ACCAGGAGCA GGGGAAAAAG GTGGGACTTA TAGGCACCCT TTACGTAAAG
CTGGGGGAGA AGGCCTTTCC GGGGGAGCGC ACCACACCCG AGTCGCTGGA CCTGCAGTCC
TGGCTTGCCC GCATGGTGGA GGAAGGAATA GAGGTGGCGG TTATGGAGGT TTCCTCCCAC
GGGCTGGCCT TGGAGCGGGT GACCGGGGTG GCGTTCGACG TAGCCGTCTT CACCAATCTC
ACCCAGGACC ACCTGGACTT CCACCGCGAC CTGGAAGACT ACTTTCAGAC CAAAGCCCGG
CTTTTTACGG AGCTTTTGGG GGAGAAGCCG GGGAAAAAGC TGGCGGTCAT TAACCGGGAC
GACCCCTATG GGCAGCGGCT CACATCTTTA TGCCGGGGAG TAGAAGTGCT GACCTACGGT
TTAAAGGAGG GAGAGGTGCA CGCCCTAGAC TATGAGCTCC GTCCCGAAGG CACCCGTCTT
CTGGCCAGCG CAGGGGGAGA AAGGGTAGAA GTAAAGCTTT CCCTGCCGGG GATCTTTAAC
GTCTACAACG CCCTGGCGGC TCTGGCCGTG GCGGTGGGAG AGGGAATGCC TTTGGATCTG
GCCGCCCGCG CTTTGTCCCG GGTGCAGGCC GTTCCCGGGA GGTGCGAGCG GATCGACGAG
GGGCAGGACT TTACGGTACT GGTCGATTAC GCCCATACTC CCGACGGCCT GCTGAATATC
CTGCGCACTG CCAGGGAGAT AAGCCGGGGG CGGGTTATCG TGGTTTTCGG GTGCGGTGGA
GACCGGGATC CCTCCAAACG GCCGGTGATG GGAAGAATAG CTGGAGAGTA TGCCGACCTC
GTGGTGGTCA CTTCCGACAA CCCCAGAAGC GAAGATCCGG TCGCCATTAT GCAGGCCATC
GCCCAGGGCT TGGCCCAGGT GGCTCCTCCC TCCCGCTACC TGCTCATCGA GGATCGGGAG
GCAGCCATAA AAGAGGCCTT TGCCCGCGCC CGTCCGGGAG ATATAGTTAT ACTAGCGGGC
AAGGGGCACG AAAACTGTCA GATAATAGGG GATAAGCGCA TCCCCTTCGA CGACCGGGAA
GTGGCCCGCC GTCTCTTGCG GGAGATGAAG AGCCGATGA
|
|---|
| Protein sequence | MEIIVLAAGG EPTLERIMKL NPRGLAYDSR RVEKGYIFFA IKGLVRDGHD FIPEAVARGA
IGIVAERKVE VPPGVVLEVV PNTRRALAWA AAQFYGHPSR KLHVVGVTGT NGKTTTTHLL
SSLYQEQGKK VGLIGTLYVK LGEKAFPGER TTPESLDLQS WLARMVEEGI EVAVMEVSSH
GLALERVTGV AFDVAVFTNL TQDHLDFHRD LEDYFQTKAR LFTELLGEKP GKKLAVINRD
DPYGQRLTSL CRGVEVLTYG LKEGEVHALD YELRPEGTRL LASAGGERVE VKLSLPGIFN
VYNALAALAV AVGEGMPLDL AARALSRVQA VPGRCERIDE GQDFTVLVDY AHTPDGLLNI
LRTAREISRG RVIVVFGCGG DRDPSKRPVM GRIAGEYADL VVVTSDNPRS EDPVAIMQAI
AQGLAQVAPP SRYLLIEDRE AAIKEAFARA RPGDIVILAG KGHENCQIIG DKRIPFDDRE
VARRLLREMK SR
|
|---|
| |