| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1521 |
|---|
| Symbol | |
|---|
| ID | 8491515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1514221 |
|---|
| End bp | 1515048 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 646359513 |
|---|
| Product | ribosomal protein L2 |
|---|
| Protein accession | YP_003239466 |
|---|
| Protein GI | 260893369 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0090] Ribosomal protein L2 |
|---|
| TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGTTA AGCGCTACAA ACCCACCTCG CCGGGCATCC GCTTCGTCAC GGTATCCACC
TTCGAGGAGA TCACCAAGAC GGAGCCCGAG CGCTCCCTGG TTAAGCCCTT GAAGAGGCGG
GCGGGTCGTA ATAACCAGGG AAGGATAACG GTGCGCCACA AGGGCGGGGG GCACAAGCGC
CTTTACCGGA TAATCGACTT CAAGCGGGAC AAAGACGGCA TCCCGGCCAA GGTGGCGGCC
ATAGAGTACG ACCCTAACCG CTCGGCCCGC ATAGCCCTCC TGCACTACCG GGATGGGGAG
AAGCGCTACA TCCTGGCACC GGAGGGGTTG AAGGTCGGGC AGGAAGTGAT GTCCGGGCCC
GAGGCCGACA TAAAGGTAGG GAATGCCCTG CCTCTGCGCT ACATACCGGT GGGTACGCTG
GTGCATAACA TAGAGCTCAA CCCGGGCGAG GGGGGCAAGC TCGTGCGGGC GGCGGGCACG
GCGGCCCAGA TCCTGGCTAA AGAAGGGGAT TACGCCCACA TAAGGATGCC CTCGGGCGAG
ATAAGGCTTA TACATCTCGA CTGTCGGGCC ACCATAGGGC AGGTAGGAAA CGTGGACCAC
GAGAACATAG TCATTGGTAA GGCCGGGAGG GCGCGCTGGC TGGGAATAAG GCCCACGGTA
CGCGGTTCGG CCATGAACCC GGTGGACCAT CCCCACGGTG GTGGTGAGGG TAAGGCACCT
ATTGGTCTTC CTCACCCCAA GACGCCCTGG GGCAAGCCTG CTCGCGGTGT GCGGACGCGC
AAGGCCAAGC CGAGCGACAA GTTCATTTTG AAGCGGCGCT ACGAGTAA
|
|---|
| Protein sequence | MGVKRYKPTS PGIRFVTVST FEEITKTEPE RSLVKPLKRR AGRNNQGRIT VRHKGGGHKR
LYRIIDFKRD KDGIPAKVAA IEYDPNRSAR IALLHYRDGE KRYILAPEGL KVGQEVMSGP
EADIKVGNAL PLRYIPVGTL VHNIELNPGE GGKLVRAAGT AAQILAKEGD YAHIRMPSGE
IRLIHLDCRA TIGQVGNVDH ENIVIGKAGR ARWLGIRPTV RGSAMNPVDH PHGGGEGKAP
IGLPHPKTPW GKPARGVRTR KAKPSDKFIL KRRYE
|
|---|
| |