| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1504 |
|---|
| Symbol | secY |
|---|
| ID | 8491498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1506567 |
|---|
| End bp | 1507826 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 646359496 |
|---|
| Product | preprotein translocase subunit SecY |
|---|
| Protein accession | YP_003239449 |
|---|
| Protein GI | 260893352 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0201] Preprotein translocase subunit SecY |
|---|
| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAACA ATCTCAGGGT AGCCGCGGGG CTTAAGGAGT TGAGGAGCCG TCTGCTTTAT
ACCCTGGCCT TGCTCCTGGT CTTCCGCCTG GGGGCGCATA TCCCTGTGCC TGGGGTCAAC
CCCCAGGAAG TGGCCAGGCT CATAGAGTCG GGGTTGATAT TCGGCTTCTT CGACGTCATC
TCCGGCGGAG CTTTCAAAAG CTTCTCGATC TTTGCCATGA GCATAGTGCC CTACATTAAC
TCCTCCATCA TCATGCAGCT GCTGACGGTG GTTATACCCC GCCTGGAGCA GCTGGCCAAG
GAGGGGGAGG AAGGCAGAAG GAAGATCGTC GAGTACACCC GCTACGGCAC AGTGATCCTG
GCCTTCATCC AGGCGCTAGG GATGACCGCT TACCTGCGCC ACGCCCTGCT CCACCCTGGC
CTGGGAAGCT ACCTGGTGGT GGCGATAAGC CTCACCGCCG GCACGGTGTT CCTCATGTGG
TTGGGGGAGC AGATAACGGA GAAGGGGATC GGCAACGGCA TCTCTCTTTT AATCTTCGCC
GGAATCGTCT CCCGGATCCC GGCCGGAGGA GCACGACTTA TAAGCTACCT ACAGGCGGGC
ACCATTAGCT GGTTTAACAT CCTGGTGTTG CTGGTCATCG GTGCCCTGGT GATTGCCGGG
ATCGTGGCCA TGAACGAGGC GCAGCGCCGC ATTCCCGTGC AGTACCCCAA GCGGATAGTG
GGACGGCGGG TTTACGGTGG CCAGAGTACC CATCTTCCCC TTAGAATAAA TATGGCGGGG
GTTATCCCGG TAATCTTCGC CTCCTCGCTC CTCTTCTTGC CGGAGCAGAT AGCAGGATGG
TTTAAGGGTC ATCCGGTGGC TGACTGGTTC CTGCGGGTGT TTCACTGGGG TTCTTTCTGG
CATACGTTCA TTTATGCGCT TCTAATTATA GGCTTTACCT ACTTCTACAC GGCGGTGATC
ATGAACCCAC TGGACATAGC AGATAACCTC AAAAAGTACG GGGGCTTCAT CCCCGGTATC
CGTCCGGGGC GCCCCACGGC GGAGTACATA AGCCGGGTGA TGTCCCGGAT AACCCTGGTA
GGCGCGGTTT TCCTGGCGCT TATCGCCATT CTGCCGAACT TCGTGCTCCT CGTAACCCGC
ATCCCCAATG TCTATTTCGG GGGTACGGCG CTTCTGATTG TGGTGGGCGT GGCGCTGGAG
ACGATGAAGC AGCTGGAGGC CCACCTCTTG ATGCGGAGCT ACCAGGGCTT TATAAAATAA
|
|---|
| Protein sequence | MLNNLRVAAG LKELRSRLLY TLALLLVFRL GAHIPVPGVN PQEVARLIES GLIFGFFDVI
SGGAFKSFSI FAMSIVPYIN SSIIMQLLTV VIPRLEQLAK EGEEGRRKIV EYTRYGTVIL
AFIQALGMTA YLRHALLHPG LGSYLVVAIS LTAGTVFLMW LGEQITEKGI GNGISLLIFA
GIVSRIPAGG ARLISYLQAG TISWFNILVL LVIGALVIAG IVAMNEAQRR IPVQYPKRIV
GRRVYGGQST HLPLRINMAG VIPVIFASSL LFLPEQIAGW FKGHPVADWF LRVFHWGSFW
HTFIYALLII GFTYFYTAVI MNPLDIADNL KKYGGFIPGI RPGRPTAEYI SRVMSRITLV
GAVFLALIAI LPNFVLLVTR IPNVYFGGTA LLIVVGVALE TMKQLEAHLL MRSYQGFIK
|
|---|
| |