Gene Adeg_1484 details

Gene Information

• Locus tag: Adeg_1484
• ID: 8491477
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ammonifex degensii KC4
• Kingdom: Bacteria
• Replicon accession: NC_013385
• Strand: -
• Start bp: 1493235
• End bp: 1493819
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 646359476
• Product: competence protein ComEA helix-hairpin-helix repeat protein
• Protein accession: YP_003239430
• Protein GI: 260893333
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1555] DNA uptake protein and related DNA-binding proteins
• TIGRFAM ID: [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region; [TIGR01259] comEA protein

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGACCTTCG GGAAGCGAGA ATATTTCGTG GCCCTGGCGC TGGGGATAGC TTTGCTGTTA 
GGCTTAGGGG TCAGGCACCT CTTTTCCCGC CCGGTTGAGG TAACGCCTGC TCCTCCGGCA 
GTGGAGCGGG AGGAAAAGAT AAGAGGTACG GTGTGGGTGC ACGTGGCAGG GGAAGTTAGT 
CATCCCGGAG TTTACGAACT CCCTGCCGGC AGCCGGGTAA AGGATGCCCT GGAAAAGGCT 
GGCCTTCTTC CAACGGCCGA CCCCCACGCC CTGAACTTGG CGCAGGTCTT GGTGGACGGG 
CAGAAGATCG TAGTCCCTCC CAAGCTTGCA GAGGGAAAAG AAGGCGAGGT AAATAACCCC 
TTTGCTACTC GGGTTTCTGC TTCCTCCGGG GGGAAGATCA ACCTCAATAC CGCCGATGAG 
GCCGCGCTTC AGACCCTGCC TGGGATAGGC CCTACGCTGG CGCGCCGCAT TGTGGAGTAC 
CGGGCCAAGA ACGGTCCGTT TACCTCGGTG GAGGACCTGG CTAAGGTGCC AGGCATCGGT 
CCCAGGCGCC TGGAGCAGTT GCGCGAGTAC GTGTGCGCCC CTTGA 

 

Protein sequence

MTFGKREYFV ALALGIALLL GLGVRHLFSR PVEVTPAPPA VEREEKIRGT VWVHVAGEVS 
HPGVYELPAG SRVKDALEKA GLLPTADPHA LNLAQVLVDG QKIVVPPKLA EGKEGEVNNP 
FATRVSASSG GKINLNTADE AALQTLPGIG PTLARRIVEY RAKNGPFTSV EDLAKVPGIG 
PRRLEQLREY VCAP