| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1377 |
|---|
| Symbol | |
|---|
| ID | 8491369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 1380817 |
|---|
| End bp | 1381848 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 646359374 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003239329 |
|---|
| Protein GI | 260893232 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000017541 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCTGTCC CGGTGTTCTT CTTCGTGTCC CACCTGCGCT CGCTGCTTAA TATGCCCCTC
GCACAAGTAG CTAAAGAGCT AGGCATAGCC ACCAGCTACC TGTACTATCT GGAAACTTTT
GACCGCCCGC CCGACCCTGA CCTCGCCGTC CGCCGGAAAA AAACTACCCT GGCCGAGGCC
ACAGCGGCGT TCCTCAATTC CCGCGTCCAC ATACCCGTCG CCTTCCACTT CCTTGAGACC
CCGCGCCTTA CTGACCCAAA CGAGGTTCAG CTCTGTTTTG AACGCGAGGC GCTTTTCCAT
CAGCTCTTTT CCTCTCCCCT TCTGCTCAGG CTGCTAGACG ACCCCCTTTT CTTGAACACC
CTGCTCCCCT TGCTCTCCGC CGGGGCCTAC CAACCCCGAG AGTGGCACGT CAAAGCGCCT
CACGACGCCA ACGCTGCCCG TGCCTTGTGG TGGTTTTTCT CCAGGTTTTG CGGTTCTCTT
ACCGGACACC GGCGTGGGGA AGGAGGAGTC GTGTTCGTCC CCGACGCGCT CGACGTTTTT
TCTGCCGCCC CGGGAAGGCC GCTCGGCAAA CTCCACGGTT TTCCCTCTCT TCAAGACCCG
GGGCAGGCGA AGTTTTTGCG GCTGTGGCTG TACCTCATTA CCGAGAAGAT CCTGCTCTGC
CCTGCCCCAC CCCCCTCGCC CAGAGTCCAG TCCGCCTGGC GCGAGTGGTA CCACCTGTAT
AACGCCCCTT GGTGGATGCG GATCGAGAGG ATGAGAGACG AGATCCCAGA GTTTTCCAAG
GTCTTGCCGC CCAACTGGTG GGTTCGTGAA TGTGTGTGCC GCAGCAGGGA AGTCTTTTGG
TTCGCCCCTC CCGACTTTCT CCCCCCTCCC GCCTTTGCCG CCGTTTTTCT CACCTGTTTT
CCCCCAGAGG TGGGGAAGGT CACCGTGTTT TGGGGACCCC CGGTTCCTGT AGACGGCTAC
ACTGCGCTCG AGGTACATCC CTTCTGCCTC GTTCTGGGGG ACCACCTTCC CCCTCTTCCG
GACGGGTCTT AA
|
|---|
| Protein sequence | MPVPVFFFVS HLRSLLNMPL AQVAKELGIA TSYLYYLETF DRPPDPDLAV RRKKTTLAEA
TAAFLNSRVH IPVAFHFLET PRLTDPNEVQ LCFEREALFH QLFSSPLLLR LLDDPLFLNT
LLPLLSAGAY QPREWHVKAP HDANAARALW WFFSRFCGSL TGHRRGEGGV VFVPDALDVF
SAAPGRPLGK LHGFPSLQDP GQAKFLRLWL YLITEKILLC PAPPPSPRVQ SAWREWYHLY
NAPWWMRIER MRDEIPEFSK VLPPNWWVRE CVCRSREVFW FAPPDFLPPP AFAAVFLTCF
PPEVGKVTVF WGPPVPVDGY TALEVHPFCL VLGDHLPPLP DGS
|
|---|
| |