| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1241 |
|---|
| Symbol | thiH |
|---|
| ID | 8491233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 1252404 |
|---|
| End bp | 1253882 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 646359247 |
|---|
| Product | thiamine biosynthesis protein ThiH |
|---|
| Protein accession | YP_003239202 |
|---|
| Protein GI | 260893105 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
|---|
| TIGRFAM ID | [TIGR02351] thiazole biosynthesis protein ThiH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.721049 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTGA GCTTAGCCGA AAGGACTTGG CGCGACAAGC GCCTGGAGAT GATTAAGAAG
TACGAGGAAG AAGAGAAGCG TCAGGACTTT ATCAAGGAGG AGGAGATCTG GCGTATCCTG
GAAGAGAAGG CTCATCCTGA GCCGGCTGAG GTGCGGGAGG TATTGGCCAA GGCGCGGGAA
CTCAAGGGGC TTTCGCCCGA AGACACAGCG GTGCTGATCA ACACCAAAGA CCCGGAGCTT
TTGCAGGAGC TCTTTGAAAC CGCCTTCTGG ATCAAGAACC AGGTTTACGG CAACCGCATC
GTGCTCTTCG CCCCCCTTTA CGTCTCCAGC CCCTGCGTCA ACAACTGTGT TTACTGCGGC
TTCCGCCATT CCAACGAAGC AGTTTATAAG CGAACCCTCA CCATGGAGGA GCTGGCTCAG
GAAGTTAGAG TCATTACCCG AGTGGGACAC AAGCGGGTGC TGGCGGTCTT CGGCGAGCAT
CCCGCCAGCG ACGTGGACTA CATCTGCCGC TCGCTCGAGA CCATCTACGC CACTAAGCAC
GGCCGCGACG AGATACGGCG GGTCAATGTC AACGCTGCTC CCATGACGGT GGAAGAGTAC
CGGCAGATCA AGGAAGTAGG CATAGGCACC TATCAGGTAT TCCAGGAGAC TTACCACCAC
GAGACCTACC GGCGTCTACA TCCCCCAGAC ACTTTGAAGC ACTCCTACAA GTGGCGCCTC
TTCGCACTAC ACCGGGCTCA GGAGGCCGGG ATAGACGACG TGGCCATCGG GGTGCTCTTC
GGACTTTTCG ACTGGCGTTT CGAGGTGCTG GGCCTCCTTT ACCACGCCAT GGACCTGGAG
AGGGAGTTCG GCGTGGGGCC TCACACCATC TCCTTCCCCC GGCTGGAGCC GGCGCTCAAC
ACTCCCTTCA CCACTAACTC TCCTTACTTA GTTAGCGACG AAGAGCTCAA GAAGATCATC
GCCATCCTGC GCTGCGCCGT GCCCTACACC GGGCTCATCC TGACCGCCCG CGAGAATCCG
GAGCTTAGGC GCGAGCTCAT AAGACTGGGT GTTTCCCAGA CGGATGCCGG CTCCCGGATC
GCCGTGGGAG GCTACTCGGA AATGGAGAAG GAACACATCT TGGAGCGGCA GCAGTTCAAG
ATCAACGACA CCCGGAGCCT CGACGAGTTC ATCTACGACC TCTGCCAGGA CGGCTACATC
CCCTCCTTCT GTACCGCCGG CTACCGGGCC GGCCGGACCG GGTGCCACTT CATGGAGTTC
GCCAAGAAGG GCTTGGTAAA GAACTTCTGT GTGCCCAACG CCATCCTTAC CTTCAAAGAA
TACCTGCTGG ACTACGCCTC TCCCCGCACC CGCGAGCTAG GGGAGAAAGT CATCGAGCGG
TACCTGCAGG AGGTCGAGGA GCGCCTGCCG CGCCTGGCAG AGAAGGTGCG GGAATACCTG
GCTAGGATGG AGGCGGGAGA GCGTGACCTC TACGTTTAA
|
|---|
| Protein sequence | MALSLAERTW RDKRLEMIKK YEEEEKRQDF IKEEEIWRIL EEKAHPEPAE VREVLAKARE
LKGLSPEDTA VLINTKDPEL LQELFETAFW IKNQVYGNRI VLFAPLYVSS PCVNNCVYCG
FRHSNEAVYK RTLTMEELAQ EVRVITRVGH KRVLAVFGEH PASDVDYICR SLETIYATKH
GRDEIRRVNV NAAPMTVEEY RQIKEVGIGT YQVFQETYHH ETYRRLHPPD TLKHSYKWRL
FALHRAQEAG IDDVAIGVLF GLFDWRFEVL GLLYHAMDLE REFGVGPHTI SFPRLEPALN
TPFTTNSPYL VSDEELKKII AILRCAVPYT GLILTARENP ELRRELIRLG VSQTDAGSRI
AVGGYSEMEK EHILERQQFK INDTRSLDEF IYDLCQDGYI PSFCTAGYRA GRTGCHFMEF
AKKGLVKNFC VPNAILTFKE YLLDYASPRT RELGEKVIER YLQEVEERLP RLAEKVREYL
ARMEAGERDL YV
|
|---|
| |