| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1170 |
|---|
| Symbol | |
|---|
| ID | 8491158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1185879 |
|---|
| End bp | 1186868 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 646359177 |
|---|
| Product | Thiamine biosynthesis protein-like protein |
|---|
| Protein accession | YP_003239136 |
|---|
| Protein GI | 260893039 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAGGCAC TGGCTCTCTT TTCCGGCGGA CTCGACAGCA TCTTGGCGGT AAAGCTTATA
AAGCTTCAGG GCATAGAAGT GGTGGGAGTA GTCTTTACCT CTCCCTTTTT TGACGCTTCG
CGGGCCAAGC AGATGGCCGA GAAGCTGGGC CTCCCCTTGA GGGTGGTGGA CATAACAGAA
GAGCTTATTC CGCTTGTGCT TAATCCCCGC CATGGTTACG GGAAGCACTT CAACCCCTGC
ATTGACTGCC ACGCTCTCAT GCTGCGCCGG GCGGGGGAGC TGATGAAAGA GGAAGGCGCT
TCTTTCATCA TCACGGGAGA GGTTCTGGGA GAAAGGCCCA TGTCCCAGAA CCGCCAGGCG
CTGGAGATAG TGGCCCGGGA GGCAGGGCTG GAGGGATATG TGCTGCGACC CCTTTCGGCT
CTGCTTCTTC CTCCCACCAT CCCGGAAAAG GAAGGGTGGG TCAAACGGGA AAAGCTTCTG
GGTATCAAAG GGCGCTCGCG CAAAACGCAG CTGGAGCTGG CCCGCCAGTG GGGGATAGAG
GACTTCCCCA CGCCAGCCGG GGGCTGCCTG CTCACCGATC CGGGCTACGC CCAGCGGATG
AAGGAACTTT TGCGCCTGCG CCCTGCTCCT TCCCGGCAAG ATTTTGAGCT TTTAAAGTAC
GGGCGCCACT TTTTCCGGCC CGGGGTCCAG ATCGTGGTGG CCAGAAAGGA GGAGGAGAAC
GCCCGGCTGC TTACCTTGCG GGAACCGGCA GATTTTCTTC TACGCCTGAA AAATATTCCT
GGGCCGCGTA CCCTGGTGCG CGGGAACCCT GGCGAAAAGG AACTGCGTCT AGCTGCCGCC
CTGACCATCA GATACAGCAA GGCGCGGGAA AGGGAAAAGA ACCGGGTAAC GGTGGATAGG
AAAGAACCTC CTTTTACCGG GGAAATAGAA CTTAGTCGGG CGGAGGTGGA GGAGTTCCTG
GCCGAAGCCG GCGTGCCTCT GCCGAGCTAA
|
|---|
| Protein sequence | MKALALFSGG LDSILAVKLI KLQGIEVVGV VFTSPFFDAS RAKQMAEKLG LPLRVVDITE
ELIPLVLNPR HGYGKHFNPC IDCHALMLRR AGELMKEEGA SFIITGEVLG ERPMSQNRQA
LEIVAREAGL EGYVLRPLSA LLLPPTIPEK EGWVKREKLL GIKGRSRKTQ LELARQWGIE
DFPTPAGGCL LTDPGYAQRM KELLRLRPAP SRQDFELLKY GRHFFRPGVQ IVVARKEEEN
ARLLTLREPA DFLLRLKNIP GPRTLVRGNP GEKELRLAAA LTIRYSKARE REKNRVTVDR
KEPPFTGEIE LSRAEVEEFL AEAGVPLPS
|
|---|
| |