| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1146 |
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| Symbol | |
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| ID | 8491134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | - |
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| Start bp | 1162195 |
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| End bp | 1164159 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 646359155 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein |
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| Protein accession | YP_003239114 |
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| Protein GI | 260893017 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming)
[TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.778055 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGGTCA AGCGGGCAAA AAACGCTGGA TTCTGCTTCG GTGTACGGCG GGCGCTGGAG
ATCACCCTCA AAGCTCGGGA AGAAAAAGAA GGGCCTCTAT ACACCCTGGG CCCTCTCATT
CATAACCCCC AAGTGGTAGA GTTTCTGGCC GCCAAAGGCA TAAAGCTCGC CGAAAGCCTG
GAGGAGATAC CGGAGGGAAC CGTAATAATT CGTTCGCACG GGGTAGATCC CGCCGTCATC
CAGGAAGCTG AGGCTCGAGG CCTGGAAGTG ATCGATGCCA CCTGCCCCTA CGTGCGGCGA
GCTCAGGAGC TGGCCTGTGA GCTGGCCAAA CAAGGCTACC AGGTAGTTGT AGTTGGTGAC
CGGGATCATC CCGAGGTGAA GGGTATTCTG GGCTGGGCTG GCCCACAGGC AACGGTAGTG
GGAAGTGCTG AGGAGGTGGC CGGCCTTCCG GAAGCTTCGG CTTACGGCGT AGTAGCTCAG
ACCACCCAGC CGGTAAACCG CCTTCAGGAA GTGGTGCAGG CCCTACTTCC CCGGACCAAG
GAGGTGAGAG TTTATAACAC TATCTGCTCG GCCGTGGCTT CCCGGATAGA GTCAGCTTTG
GAACTCGCCC GGGAAGTAGA GGTCATGGTG GTAGTAGGGG GCCGATCCAG CGCCAACACT
AGGCATCTGG TCGAGCGTCT AAAGCTGTCC GGAGTCCCTA CCTATCATGT GGAGACGGCG
GCGGAGCTCC GGCCGGAATG GTTCATGGGG GTAAGCCGGG CCGGGCTCAC GGCCGGAGCC
TCTACTCCTG ACTGGATCAT CGAGGAGGTA GAAAAACGCA TGCGGGAAAT TGGGGAAATG
AGCGCCGCGG AGCAAATGGA AGCGGTAGGC GTCAAGACCT TCCGCGGCGG GGAGATCGTT
AGGGGCACGG TGGTAGAGAT AAACCAGGGG GAGGTCCTAG TGGACATCGG AGCCAAGACG
GAGGGGGTCA TCCCCTTAAG GGAGCTCTGT TGCTGCGAGG TTTCCTCTCC CCACGAGGTA
GTTAAGGTGG GGGATGAGAT CGATGTCTTC GTGGTGAAAG CGGAAGACGC TGAGGGCCGA
ATCATCCTGT CCAAAGCGCG GGCCGACGCC ATAGCTGCCT GGAAGAAGTT GGCAGAAGCC
TTCGCCAACG GAACCCCGGT AGAAGGTATA GTACGCGAAG TGGTCAAGGG CGGGCTCATC
GTGGACGTGG GCGTGCGGGC CTTCCTGCCT GCCTCACTGG TGGACATCAG CTACGTGGAA
AACCTCAGCA CTTATCTAGG GCAGAAGGTA AGGGCCAAGG TCATCGAACT TGACCGGAGC
CGCAAGAAGG TCGTCCTGTC GCGCAAGGCC GTCCTGGAGG AAGAAGCCGA GAGGCGCCGT
CGGGAGACTT GGGAGAAGCT TCAGGAAGGG GCCGTGGTCA AGGGAGTGGT GCGGCGCATC
GTTCCCTTCG GCGCCTTCAT CGACCTGGGC GGGGTGGACG GGCTACTGCA CGTCTCCGAG
ATAGCCTGGC ACCGGGTCAA CTCCCCGGAT GAGGTGCTGA AGGAAGGGCA AGAGATCGAG
GTTAAAGTAA TCAAGGTGGA CCGAGAGAAC GAGAAGGTGA GTCTCTCGCG CAAAGCGCTG
CTGCCCGATC CCTGGGAGAA GGTGCCCGAG AAGTACCCGG TAGGAAGCTT GGTAGAGGTA
AAGGTGGTCA GGCTCGCTCC CTTCGGGGCC TTTGTAGAGC TGGAGCCGGG GGTAGAAGGA
CTCATTCATA TTTCTCATTT TGCCGACTGG CACGTAGAGA AGCCAGAGGA CGTCTTGAAA
GAAGGGGATG TGGTCACGGT GCGGGTCATA AGCTTTGATC CTCAGGAGAA GAGGCTGCGC
CTTTCTCTGC GGGAAGCCGT GCGCACAGAA GAGCCCCAGC CCAAAGAGAA GAAAGAAGAC
ACCGTGACCT TAGGCGACGT TTTCGGCGAC CTTTTGAAGT CCTGA
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| Protein sequence | MEVKRAKNAG FCFGVRRALE ITLKAREEKE GPLYTLGPLI HNPQVVEFLA AKGIKLAESL
EEIPEGTVII RSHGVDPAVI QEAEARGLEV IDATCPYVRR AQELACELAK QGYQVVVVGD
RDHPEVKGIL GWAGPQATVV GSAEEVAGLP EASAYGVVAQ TTQPVNRLQE VVQALLPRTK
EVRVYNTICS AVASRIESAL ELAREVEVMV VVGGRSSANT RHLVERLKLS GVPTYHVETA
AELRPEWFMG VSRAGLTAGA STPDWIIEEV EKRMREIGEM SAAEQMEAVG VKTFRGGEIV
RGTVVEINQG EVLVDIGAKT EGVIPLRELC CCEVSSPHEV VKVGDEIDVF VVKAEDAEGR
IILSKARADA IAAWKKLAEA FANGTPVEGI VREVVKGGLI VDVGVRAFLP ASLVDISYVE
NLSTYLGQKV RAKVIELDRS RKKVVLSRKA VLEEEAERRR RETWEKLQEG AVVKGVVRRI
VPFGAFIDLG GVDGLLHVSE IAWHRVNSPD EVLKEGQEIE VKVIKVDREN EKVSLSRKAL
LPDPWEKVPE KYPVGSLVEV KVVRLAPFGA FVELEPGVEG LIHISHFADW HVEKPEDVLK
EGDVVTVRVI SFDPQEKRLR LSLREAVRTE EPQPKEKKED TVTLGDVFGD LLKS
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