| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1092 |
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| Symbol | |
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| ID | 8491080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | + |
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| Start bp | 1104262 |
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| End bp | 1106385 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 646359109 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_003239068 |
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| Protein GI | 260892971 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01073] ATP-dependent DNA helicase PcrA |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0037216 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTGGC TTAAGGAACT CAATCCGGAG CAAAGGGCAG CGGTAGAGCA CGGGGAAGGG
CCTCTTCTGG TCTTGGCCGG GGCTGGCAGC GGCAAGACGA GAGTCCTCAC CTACCGCATT
GCTTATCTCA TTACCTACCG GGGTGTTCCG CCGGAGGCCA TCTTGGCTCT TACTTTCACC
AATAAGGCGG CGGAAGAGAT GCGGGCGCGC GTCACCAGTC TCTTACCCCG AGAGGCGGAA
GATCTGTGGG TGATGACCTT TCATGCCGCC TGCGCCCGGC TTTTGCGCCA GGAGATCCAC
CATCTAGGGC GCGATCGCGA CTTTGCCATC TACGATGAGG ACGACCGCCG GGCTTTGATG
AGAGAGTGCT TGCGCGAGCT TGACTTGGAC GAGCAGCGTT TTCCTCCTGC TGGAATCATC
GGGGCCATAT CCTGGGCCAA GAACTGGCTG GTCACACCGG AGATAATGGC GGAAAGGGCC
CGGAGTATCT ACGAGGAGAA GGTGGCCAAG ATCTTCGCCC TCTACCAGCA GAAGTTGCGG
CAGTACAATG CTCTTGACTT TGACGACCTG CTGGTCGAGG CGGTGCGCCT TTTCCGCGAG
CACCCGGAAG TGCTGGCCCG CTGGCAGCGG CGCTTCCGGT ACATCTTGGT GGACGAGTAC
CAGGACACCA ACCACGCCCA GTACGTCTGG CTGAACCTTT TGGCCCAGGG ACACCGCAAT
ATTACCGTGG TGGGTGACCC CGACCAGGCC ATTTACGGCT GGCGGGGCGC GGATATCCGC
AATATTCTTT CCTTCGAGCG CGACTACCCT GAGGCGCGGG TGATCAAGCT AGAGAAAAAT
TACCGTTCTA CTGCTCCCAT CCTGGCCTTG GCCGACGAGA TCATCAAGTA CAACCAGCTC
CGCAAGGAGA AGGTTCTGCG TCCGGTGAAA CCAGGAGGCG AGCTCCCGGT GGTTTACGTG
GCGACGGACG AAGTTGGGGA AGCTAACTTC GTGGCCGAGA CCATAAAGCG GCTCCGGGCA
AGCCACGGTT ATTCCTGGCG GGACTTTGCC GTCCTTTACC GCACCAATGC CCAGTCGCGC
GTTTTAGAGG AAGTTTTTCT GGTAGCGGGC ATACCCTACT TCATCGTGGG CGGGGTGCAG
TTTTACGCCC GCAAGGAGAT AAAGGACGTT CTGGCCTACC TGCGGCTGGT GGTCAACCCC
GCCGACGCTT TAAGCCTTAA GCGGGTGATC AATGTACCCC CGCGGGGGAT AGGCGAAGGG
TATTACAACC GGTTGTTGAA CTTCGCCTCT TCGCAGGGGC TATCGCCGGC CCTGGCCCTG
CTTCAAGCAG AGGATATTCC CGGTCTGCCG CGCAGGGTAA AGGCAGCCAT GCGGGAACTG
GGGGAGTTAC TTACCGAGCT GCGTAGCCGG GCGATGGGTC CGGTCAAGCC CTTGGTAGAA
GAGATTTTGT CCCGTACCGG TTATCGGACT CATCTCCTTA AGGAAGGAAC GCCGGAGGCC
TTAGCCCGCC TAGAGAACTT GCAGGAACTC ATCTCGGTGG CCTGGGAGTT CGATATGGAG
GTCGGAGGAA ATCTCTCGGA CTTCCTGGCC TCGATAGCCC TCTTTTCCGA GGTGGACAAG
TACGACCCAG AGACCGACGC CGTGGTCCTC ATGACGCTGC ATAGCGCCAA GGGGTTGGAG
TTCCCGGTGG TCTTTCTGGT AGGTATGGAG GAGGGGCTTT TTCCCCACGC CCGCTGCCTG
GGAGATAGGG CAGCACTGGA AGAGGAGAGA AGGCTTTGTT ACGTGGGGAT AACCCGCGCC
AAAGAGCGCC TGTATCTCGT CCGCAGCCAG GAAAGGCGTC TTTACGGAGA GGCGAGGGCC
AACCCTCCCT CCCGGTTCCT GCGGGAAATA CCCGCCGAGC TTTACGAGCT TTATTCACCG
CCACCGGTGC CTGCCTGTTC TGAGCGGGCG GCGGAAGATT TGGAGCCGGG GGATCGGGTG
CGGCACCGCA AGTGGGGTGA GGGCACGGTG GTAGAGGTGA AGGGCGAGGG GGAAGAAAGG
CAGGTTACGG TGAACTTTCC CTCAGTGGGG ATTAAAACCT TACTTTTAGC CTACGCTCCT
TTAGAGAGGT TGGCAGAGGA ATGA
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| Protein sequence | MDWLKELNPE QRAAVEHGEG PLLVLAGAGS GKTRVLTYRI AYLITYRGVP PEAILALTFT
NKAAEEMRAR VTSLLPREAE DLWVMTFHAA CARLLRQEIH HLGRDRDFAI YDEDDRRALM
RECLRELDLD EQRFPPAGII GAISWAKNWL VTPEIMAERA RSIYEEKVAK IFALYQQKLR
QYNALDFDDL LVEAVRLFRE HPEVLARWQR RFRYILVDEY QDTNHAQYVW LNLLAQGHRN
ITVVGDPDQA IYGWRGADIR NILSFERDYP EARVIKLEKN YRSTAPILAL ADEIIKYNQL
RKEKVLRPVK PGGELPVVYV ATDEVGEANF VAETIKRLRA SHGYSWRDFA VLYRTNAQSR
VLEEVFLVAG IPYFIVGGVQ FYARKEIKDV LAYLRLVVNP ADALSLKRVI NVPPRGIGEG
YYNRLLNFAS SQGLSPALAL LQAEDIPGLP RRVKAAMREL GELLTELRSR AMGPVKPLVE
EILSRTGYRT HLLKEGTPEA LARLENLQEL ISVAWEFDME VGGNLSDFLA SIALFSEVDK
YDPETDAVVL MTLHSAKGLE FPVVFLVGME EGLFPHARCL GDRAALEEER RLCYVGITRA
KERLYLVRSQ ERRLYGEARA NPPSRFLREI PAELYELYSP PPVPACSERA AEDLEPGDRV
RHRKWGEGTV VEVKGEGEER QVTVNFPSVG IKTLLLAYAP LERLAEE
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