Gene Adeg_0972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeg_0972 
Symbol 
ID8490958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAmmonifex degensii KC4 
KingdomBacteria 
Replicon accessionNC_013385 
Strand
Start bp984913 
End bp986907 
Gene Length1995 bp 
Protein Length664 aa 
Translation table11 
GC content54% 
IMG OID646358996 
ProductCRISPR-associated protein, Csh1 family 
Protein accessionYP_003238957 
Protein GI260892860 
COG category 
COG ID 
TIGRFAM ID[TIGR02556] CRISPR-associated protein, TM1802 family
[TIGR02591] CRISPR-associated protein, Csh1 family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTGGAAG CCATAGAGCT GCTGGGGAAG ACGGTAGGTG GCGGGGACTT AATCGCAGGA 
ATAATCGAGG ATTTAAAAAA CATTCCGAAG GATCCGGAAG AAGGATTTTA CCTAGTCAAG
CTCGACTTTC GGGAAGAAGA GCCAGGGAAG TTGCGGCTTC GCTTCGATTT CGAGGAAATA
CCGAAAAACA AAGAACAGCG GTACGAATTT CTTACCCGCT GGCGGCACGT GGGCAACGCC
TCCGGCCACA ACCCCCAGAA ATTTCTCACC ACCAACCAAC TGCACTACCT GACCGGACAG
GTAATCCCCA ATCTGCTCCA GGAGCTGTCA AGCCAGGGGG AGGAAGGTTC AGAGCTGGCC
CGGAAGCTCA AGATAATCCG CGAGAAGGCC TTTTCCTGCC TCGAGGGTGG GGAGGTAGTA
CTTGACCTTG GACGTCTGGG CATAGCAGGG GAGGAAAAGG CAGAAAAAGA GGAGAGCAAG
CAAGGGAAAA AGAAGGCCAA GGAGCAGGCC AAGCAGGTAG CGGATGTCCT GGTCAAGCTG
GTGGAGCAAA AGCTGGGAAT CAAAAAGAGG CAGGTGGGCC TCTGGACCCT ACTTTTTAAC
GGCGAGCCGC TGGTACAGGC CGAGCCCTAC GACCGGGTGA TTTTGCGCTA CCGCCTGGCC
GGCTTTGAGG GAGAAGATCT GGTGGCGGGC ACCTGCCTGG TCTGCGGGAA GGAAAAGGAG
AAAGTGAGCG CTCAAGCCTT CAAGCGCTTG AAGTTCTTCA AGCCCTATAT CACCGATAAA
GTGGGCTTCG CTTCCGGGGT AAGCGAATCG GGCTTTATCC GCAACTTCCT CATCTGCGAG
GAATGCTTCC GCTCTTTTCT GGTAGTGGAA AACTACCTGC CCCAGCACCT GAATTTTCGG
GTGGGTACCC TTAGCTTCCT TCTTCTTCCC ACCTTTATCC TTTTCTCCGA TTCTCCCGCC
TGGCGGCAGG AGTTTTCCCG GCTTATGAAT AAGCTTACCC GCAAAACCCA GGCCTTTACT
GATCTTTCGG CTCTGATAAA GGGGGAAGAA GAGCTCGAAC GCACCCTGGA AGAGCTCTTT
GAGGAGGAGG GGATAGAAGA CCAGGCGCTA CTCAACTTCC TTTTTTACCA GAAAACGCAA
AGCGAGTTCC GCATTTTGGG CCTGATAAAA GATGTGGCTC CCAGCCGGCT TTCCCGGCTC
TTCCGCCGCT CGAATGCACT GGCCCAGGAA GGCAGACGCC TTCTGGGAGG GGAGGTAAAG
GATTGGTGGA TCGACCTTAC CCGCCTTTAT TACCTTCTGC CCTTGCGGGG GCGGGATAGG
GCCGAGCACA AAAAACTCCT TTACCTTTAT CAGGGTTTGC TGCGCGGCGA ACCCATCGAG
TACTCCTTCC TTGTGAAGGA GTTTCTGGAA CTGGCCCACC TTTACCTCAC CGGCCGCTTT
GAAGGCACCA ACCAGCGCAA GCCTAACTCC GGACAGGAAG AGCGGGCTCT GGCCACCCAA
CTTTTGCACG CCGGCTTTTT CCTCAAGCTT CTGCGCGAAG AAGGAATTCT TAAGGGGGTG
AAAGATTTGC CGAGCTTTGA GCCGGATCAG GAGCTTATGG TCAATCAGGA AATGCGCGAA
TACCTAAAGT CCATAAACTA CTCCGAGCCG CAGGCGGCTC TTTTCCTCCT GGGCTACCTG
CTGAACGAGG TGGGAAAGGG CCAGTACTCT TCCGGACACC AAAGCAAACC GGTGCTGGAC
AAGATCAACT ACCAAGGCAT GAACTGGAGC CGAGTGCTTA GTTTGGCCAA TCAACTTTTT
GAAAAGTTAA GGCAGTACGA CCGCCTTCGG GGGCAGAACG AGATCCTTTA CGCTGAAATG
AAAAGACTTC TCGACCGCTA CCGCCAAGAT AAGTGGCCTT TAGGCCCGGA AGAAAACGTC
TTCTACATTC TCTCCGGCTA CGCTTACGGC ACCAGGGCAA CGGTTCTGAA GAAAGAAAAG
GAGGTTGGTG AGTAA
 
Protein sequence
MLEAIELLGK TVGGGDLIAG IIEDLKNIPK DPEEGFYLVK LDFREEEPGK LRLRFDFEEI 
PKNKEQRYEF LTRWRHVGNA SGHNPQKFLT TNQLHYLTGQ VIPNLLQELS SQGEEGSELA
RKLKIIREKA FSCLEGGEVV LDLGRLGIAG EEKAEKEESK QGKKKAKEQA KQVADVLVKL
VEQKLGIKKR QVGLWTLLFN GEPLVQAEPY DRVILRYRLA GFEGEDLVAG TCLVCGKEKE
KVSAQAFKRL KFFKPYITDK VGFASGVSES GFIRNFLICE ECFRSFLVVE NYLPQHLNFR
VGTLSFLLLP TFILFSDSPA WRQEFSRLMN KLTRKTQAFT DLSALIKGEE ELERTLEELF
EEEGIEDQAL LNFLFYQKTQ SEFRILGLIK DVAPSRLSRL FRRSNALAQE GRRLLGGEVK
DWWIDLTRLY YLLPLRGRDR AEHKKLLYLY QGLLRGEPIE YSFLVKEFLE LAHLYLTGRF
EGTNQRKPNS GQEERALATQ LLHAGFFLKL LREEGILKGV KDLPSFEPDQ ELMVNQEMRE
YLKSINYSEP QAALFLLGYL LNEVGKGQYS SGHQSKPVLD KINYQGMNWS RVLSLANQLF
EKLRQYDRLR GQNEILYAEM KRLLDRYRQD KWPLGPEENV FYILSGYAYG TRATVLKKEK
EVGE